| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2705 |
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| Symbol | |
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| ID | 8545092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3725784 |
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| End bp | 3727370 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646387398 |
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| Product | Cytochrome-c oxidase |
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| Protein accession | YP_003267127 |
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| Protein GI | 262195918 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.388874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACT ATCTCCAGGC CGGCCGCGGC ATCCGCTCGT GGCTGCTCAC CACCGACCAC
AAGCGCATCG GCCTGCTGTT CTTCGCCGCC ACCTCGCTGT CGCTGCTGCT CGGCGGCGTG
TTCGCCCTGC TCCTGCGGCT CGAGCTGCTC ACGCCCGCGC GCGACCTGAT GAGCGCCACC
GCCTACAACC GCGCCTTCAC CCATCACGGC GTGATCATGG TGTGGCTGTT CATGATCCCG
TCCATCCCCG GCATCTTTGG CAATTTCGTC TTGCCCATGA TGCTCGGCGC CAAGGACGTG
GCCTTTCCGC GCCTCAACCT GGCCAGCTTC CACGTCTATG TGCTGGGCGC GCTGATCACG
CTGGTGGCCA TGGGTGCCGG CGGCGTGGAC ACCGGGTGGA CCTTCTACGC GCCCTACAGC
ACCAGCTCGC CCACGGCGGT GGCGCCGCTC GGCCTGGGCA TCTTCATCCT CGGCGTGTCG
TCGATCCTCA CCGGCCTCAA CTTCATCGTC ACCACGCACA CCATGCGCGC GCGCGGCCTG
CGCTGGGGCA AGCTGCCGCT GTTCGTGTGG GCCATCTACG CGACCAGCAT CATCCAGATC
CTGGCCACGC CCGTGCTCGG CATGTCGCTG ATGCTGATCG CCGCCGACCA CGCCTGGCAG
CTCGGCCTCT TCGACCCGGC GCAGGGCGGC GATCCGGTGC TGTTTCAGCA CCTGTTCTGG
TTCTATTCGC ACCCGGCCGT GTACATCATG ATCCTGCCGG CCATGGGCGT CATCAGCGAG
GTGGTGTGCA CCTTCGCGCG CAACCCGCCG TCGTCGTACC GGGCGATCGC GCTGTCGTCG
CTGGGCATCG CCTTCGTGGG CTTCCTCACC TGGGGCCACC ACATGTTCGT GGCCGGCATG
TCGACCCTCG ACGCCGGGGT TTTCGGCGCG CTGTCCATGT TCGTGGCCAT CTTCTCGGCC
GTCAAGGTGT TCACCTGGAC GGCGACGCTG CGCGGCGGCA GCATCGCGTT CAACACGCCC
ATGCTGTACT TCTTCTGGTT TCTGTTCCTG TTCGCGTTCG GCGGCATGAG CGGCGTGGCC
GTGGCCACCT CGTCGCTGGA CGTGCACTGG CACGACACCT ACTTCGTGGT CGCCCACTTC
CACTTCATCA TGGTCGGCGG CACGCTCACG GGCTTTCTGG CCGCGGTCCA CTACTGGTTC
CCGAAGATGT TCGGACGCAT GTACTCGGAA CGCTGGGGCA TGGTGGCCTC GGTGATGGTG
TTCCTCGGCT TCTTCTTCAC CTTCATGCCG CAGTTCCTGC TCGGCAACGC CGGCATGCCG
CGGCGCTACT ACACCTATCC CGAGCAGTAC CAGTGGCTCA ATGTGCTGTC CACGGCCGGC
GCCAGCATCC TCGGCCTGGG CCTGGTGCTC ACGCTCGGCT ATCTGCTGCT GGCGCTGCGG
GGCGGCCGGC CGGCGCCGCG CAATCCCTGG GGCTCGCGCA GCTACGAGTG GCTGGCGCCG
ACGCCGCCGC CGGTGCACAA CTTCGCCGAG CCGCCGCGCT TCGAACGCGG CCCCTACGAC
TACCACCGCC CCGAGGAGCC GGCGTGA
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| Protein sequence | MNNYLQAGRG IRSWLLTTDH KRIGLLFFAA TSLSLLLGGV FALLLRLELL TPARDLMSAT
AYNRAFTHHG VIMVWLFMIP SIPGIFGNFV LPMMLGAKDV AFPRLNLASF HVYVLGALIT
LVAMGAGGVD TGWTFYAPYS TSSPTAVAPL GLGIFILGVS SILTGLNFIV TTHTMRARGL
RWGKLPLFVW AIYATSIIQI LATPVLGMSL MLIAADHAWQ LGLFDPAQGG DPVLFQHLFW
FYSHPAVYIM ILPAMGVISE VVCTFARNPP SSYRAIALSS LGIAFVGFLT WGHHMFVAGM
STLDAGVFGA LSMFVAIFSA VKVFTWTATL RGGSIAFNTP MLYFFWFLFL FAFGGMSGVA
VATSSLDVHW HDTYFVVAHF HFIMVGGTLT GFLAAVHYWF PKMFGRMYSE RWGMVASVMV
FLGFFFTFMP QFLLGNAGMP RRYYTYPEQY QWLNVLSTAG ASILGLGLVL TLGYLLLALR
GGRPAPRNPW GSRSYEWLAP TPPPVHNFAE PPRFERGPYD YHRPEEPA
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