Gene Hoch_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2704 
Symbol 
ID8545091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand- 
Start bp3725113 
End bp3725787 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID646387397 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003267126 
Protein GI262195917 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.343343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.321582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CCGAGCAGCG CGCACACAGC GCGGCGCCCG CGGTCGCCGA GCCCGCGGTC 
GCCGAGCACT TCCAGGATCT GGCCCAGCAG CACCAGGCCG CGCGCCTCGG CATGTGGGTC 
TTTCTGGCCA GCGAGACCCT GCTCTTCGCC GCGCTCTTCG GCCTGTACGT GGCCTATCGC 
GTGAGCTACG GCGACGCCTT TGTGCGCGCC AGCCACGAAA ACGACATGCT GCTGGGCACG 
GTCAACACCG CCATCCTCAT CACCTCGAGC TTGTGCGCGG CCTGGGCCGT GGCCGCGCTG 
CGCGGCGATC GCGCGCGCAC GGCGGCGCTG AGCCTGGGCG CCACCGTGGT GCTGGGCGCC 
GCCTTCCTCG GGCTCAAGCT GCTCGAGTAT CGCGACCACT TCGCGCACGG CATCTATCCC 
GGCCGAGCGT ACGAATTCGC CGAGCTGCCG GGCGCGGGCG CGCGCCTGTT CTTCACGCTG 
TACTACGCGC TCACCGGGCT GCACGCGCTG CACGTCGTCG CCGGCATGGT GCTGCTGGCG 
CTGCTCGCGC GCGCGACCTG GCGCGGGCGC TACAGCAGCC GCGACCACGT CGCCGTGGAG 
AACGGCGCCC TGTACTGGCA CCTGGTCGAT GTGGTGTGGA TCTTCCTCTG GCCGCTGCTG 
TATCTCGCGG GGTGA
 
Protein sequence
MSTAEQRAHS AAPAVAEPAV AEHFQDLAQQ HQAARLGMWV FLASETLLFA ALFGLYVAYR 
VSYGDAFVRA SHENDMLLGT VNTAILITSS LCAAWAVAAL RGDRARTAAL SLGATVVLGA 
AFLGLKLLEY RDHFAHGIYP GRAYEFAELP GAGARLFFTL YYALTGLHAL HVVAGMVLLA 
LLARATWRGR YSSRDHVAVE NGALYWHLVD VVWIFLWPLL YLAG