| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2677 |
|---|
| Symbol | |
|---|
| ID | 8545064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3690586 |
|---|
| End bp | 3692220 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646387372 |
|---|
| Product | regulator of chromosome condensation RCC1 |
|---|
| Protein accession | YP_003267101 |
|---|
| Protein GI | 262195892 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0824266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.249754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCCA CGAGAAGTCG AACGCCGCGA CTGGCGGCGC TGTGCTGTGC GATTTTCCTG
TTTGCCTGTT CTGACGACGG CGGGCCCGAG CCCGACATCG ACGCCACCCC GCCGACCCCG
ACCGTCGACG CCGCGCCCGA ACTCGACGCG CCCGACCCGG GTATCGACGC GGGCATGGTC
GAGTGCGACG ACGCACAGGA CTGCGACGAC GGCCTGTTCT GCAACGGCGA AGAGGCCTGC
GAGCAGGGCG TGTGCGTGGC CGGCGCCGGC GACCCCTGCG ACGACGGCGT GAGCTGCACG
GTCGATACCT GCGACGAGGG CGCCGCCGCC TGCGTCAACA CCGCCGACGA CAGCCTGTGT
GACAACGGCC TGTTCTGCGA CGGCGCCGAG GTCTGCGGCA GCGCCGGCTG CGAGGCCGGC
GATCCGGTCA GCACGCCGCC CGGCCTGAGC TGCCTCAACG GCCGCGTGGC CGCGGGCTCC
GCCCACTCCT GCGCGCTGCT CGACGACGGC CAGGTACACT GCTGGGGCCG CAACGATCTC
GGCCAGCTCG GCCGCGGCAA CACCGTGACC ATCGGCGACA ACGAGACCCC CAGCGCGGTC
GCGCCGCTCA ACCTGGGCAG CCGCGTGATC GTCGACCTCA CCGCCGGCGA CCTCCACACC
TGCGCGCTGT TTTCGGACGG CGGCGTATCC TGCTGGGGTC TGGGCAGCGT CGGCAGCCTG
GGCCAGGGCA ACACCGCGAC CCTGGGCGAC AACGCGGGTG AGACCCCGGC CACCATCCCG
GCCATCAACC TCGGCGCCGC AGCCATCCAG ATCGACGCTG GCGGCTCGCA CACCTGCGCG
CTGCTGGTCG GCGGCACCGT GACCTGCTGG GGCCTCAACA ACCACGGCCA GCTCGGCTAC
GGCCACACCA ACACCATCGG CGACAACGAG ACCCCGGCCT CGGCCGGCGC CGTGGCCAAC
CTGGGCAACG TGGTCGAGAT CGCGGTCGGC GCCGAGCATA GCTGCGCGCG CAACAGCGCC
GGCGAGGTCC GGTGCTGGGG TCGCGGCTCG GCCGGCCGCC TGGGTTACGG CAACACCATC
AACCTGCACC AGCCCCGCGC CGACGCCATC GCCATCGGCG GCGCGGCCGC TCGCATCGCG
GCCGGCGGCT TCCACACCTG CGCCACCATC GGCACCAGCG TCAAGTGCTG GGGCCTGGGC
AGCTCGGGCC AGCTCGGCTA CGGCAACACC CAGACCATTG GCGACGATGC CAACGAGACG
CCGGCCACGG TGGCGGCCAT CGACTTCGGC GAGGCCATCA CCGACCTGCG CATGGGCGGC
CAGCGCACCT GCGCCGAGCT GGCCAGCGGC AGCGTGCGCT GCTGGGGCGA GAACTCCGAC
GGTCGCCTGG GCTACGGTCA CACCGACGAC CTCGGCGACA ACGCCGGCGA GGAGGCCAAC
CTGCTGCCCG ACATCAACAT CGGCGACGGC GTCGACCACC TCGCCACCGG CCTGGTTCAC
ACCTGCGCGC TGCTCAAGAC CGGCGGCGTG CGCTGCTGGG GCCCGAGCGG TGACGGCCGC
CTGGGCTACG GCAACAGCGA GTTCATCGGC GACAACGAGA CCCCGGCCGA CGCCGGCGAT
GTCCCGCTGC GCTGA
|
|---|
| Protein sequence | MFSTRSRTPR LAALCCAIFL FACSDDGGPE PDIDATPPTP TVDAAPELDA PDPGIDAGMV
ECDDAQDCDD GLFCNGEEAC EQGVCVAGAG DPCDDGVSCT VDTCDEGAAA CVNTADDSLC
DNGLFCDGAE VCGSAGCEAG DPVSTPPGLS CLNGRVAAGS AHSCALLDDG QVHCWGRNDL
GQLGRGNTVT IGDNETPSAV APLNLGSRVI VDLTAGDLHT CALFSDGGVS CWGLGSVGSL
GQGNTATLGD NAGETPATIP AINLGAAAIQ IDAGGSHTCA LLVGGTVTCW GLNNHGQLGY
GHTNTIGDNE TPASAGAVAN LGNVVEIAVG AEHSCARNSA GEVRCWGRGS AGRLGYGNTI
NLHQPRADAI AIGGAAARIA AGGFHTCATI GTSVKCWGLG SSGQLGYGNT QTIGDDANET
PATVAAIDFG EAITDLRMGG QRTCAELASG SVRCWGENSD GRLGYGHTDD LGDNAGEEAN
LLPDINIGDG VDHLATGLVH TCALLKTGGV RCWGPSGDGR LGYGNSEFIG DNETPADAGD
VPLR
|
|---|
| |