Gene Hoch_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2676 
Symbol 
ID8545063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3688196 
End bp3690505 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content72% 
IMG OID646387371 
Productserine/threonine protein kinase 
Protein accessionYP_003267100 
Protein GI262195891 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.396186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.282843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTG GGATTGAACA GCTCGAGCGC TACGAGTTGT GCGAGCGCAT CGCCACGGGC 
GGCATGGCCG AAGTGTATCT GGCCAAAGCC TACGGCGCGC ACGGGTTTGA AAAGACCCTG
GCGGTAAAGC GCATTCTGCC CGAGCTGGCC AGCGACCTGG AGTTCGAGGA GCGCTTCATC
GCCGAGGCCA AACTGGCCGT GCAGCTCTCG CACGCCAATA TCGTCCAGGT GTTCGATTTC
GGTCGCGTCG GCCGCACGCT GTTTCTGGTA CTCGAGTATG TCGACGGTCT CGACCTGGCC
GCGCTGCTGG GGCGCTATCG CAACGCCGGG CGCGAGCTGC CGCTGCCGGC GGCGTTTCAG
ATCGCCATCG AGATGGCGCG TGGACTCGAC TTCGCGCATC GCCGCCGGGT CATCCACCGC
GATGTCTCGC CCTCGAATAT CCTGCTGTCC AAGGCAGGTG ACGTCAAAGT CGCCGATTTC
GGCATCGCCG TGCCCGACGC CGAGCACATT CAGCAGGCGT CGCGGCGCCA GCGCATCATG
GGCAAGTGGC GCTACATGTC GCCCGAGCAG ACGCGCGGCG ACGATCTCGA CACGCGCTCC
GATCTGTTCG CGCTCGGCGC GATCATCTTC GAGCTGGTCA CGGGCGATAA GCTGTTCTCC
GCGACCGAGT CGGACCACAT CGTCGAGCAG ATTCACGAGA TGGACATCCC CGACCCGGCC
ACGCGCCGCA GCGGGGTGCC CGCGCGCCTG CACGAGGTGC TGTGCCGCGC CCTGGCCCGC
GATCGCAACC AGCGTTTCGA CCACGCGTCC GATCTCCAGC GCGTGCTCGC CCAGCTCTGC
CACGAGAGCA ATATCATCTT CTCGGCCCTG GAGGTCGCCG ACGCGGTCCA CGCGGTGCTG
CGGCCCGAGG AGCGCGAGGA TCTGCACTCG GGCCCGCGGC CGGTGCCGCT CGACGGCCTG
ATCCGCCAGC ACCTCGGTGT GGCCAGCGAT GTCGGCGCGC AGCGGCGCAC CAGCGCCGGG
TCGTGGTCGC GCGAGGCCAC GATCACGGGC GCCGGTGACG AGGACGACGC CGCGTCCGAG
CGGGCCGATG GGGCGGAGGC CGACGGCTCG GATACCGCGC TGACCGTGCC GGTGGGAGCC
GGCGCGCACA AGCTCAGGAC GCGCGCCGCG AGCGACACCC AGCGCCCGCC GACCATCGTC
AAGACCGGCG CCGAGCGCGA CGGCGTGAGC ATCTGGGACT ATGGAGAAGA CGGGGGCGAC
AGCGGGGGAG GCGGTGGTAA CGACCGTGAT AGCGGCGGCG AGGAGAACGC GCGCGCGCAG
CGGGCGTCGT CGTCTTCTTC TTCGGGTTCA GGCGCAGGCG CGGGCGAGGG CGTGGTGGGC
GAGGGCGGCG AGCACGCCTC GACCGAGCGG CTGATGGGTG AGTCGGCGCG CGCGGGGGCG
ACTCCGCCTG CGGCCGCGGC CAGCAAGCGC GGGCGCTGGG CGCTGGGCGC TGGCGGCGCG
GCGCTGCTGT TCGCCGCGGT GCTGAGCTAC GGCGGGCTGC GGGGTGAGTT GGGACAGTCG
GTCGAAATCG CCGATGCCGG CGCCGCCAGC GCGCCGCCGC GTGACGCCGA AGCGCTTCAG
AGCGGGATTC TGTTCATCAA TTCGCGGCCG GAGGGCGCCG AGGTGCTCAT CGACGGAGTG
CTGCAGGAGG CGCGCACGCC CAACGTGTAC CAGGTGGCCG CGCGCGAGCC CCACCGCGTC
GAGCTGCGGC TGGGCGGACA CGCGGGCGAG ATCCGCGAGG GCGTGGTGGT CGGCGCTGGC
GGCACCGCGC CGCTGCGCTT CAGCCTCGAG GCGATGCGGC GTCCGGTGCT GGTGGACAGC
GAGCCCCGGG GCGCCAAGGT GCTGCTCGAC GGGCGCCGGC TGGGCGAGAC GCCGCTGGCG
ATCGAGCTGA GCGAGGCCGA GATCGAGCGC ATCCGGGCCG GCGCGCTGGT GCTCGAGAAG
GCCGGCTATC GCGCCGAGCA GGTCGAGCTG AGCGAGGGCG AACTGCACGC GGAAGACGGC
GCATCGGTGC ATATCGCGCG CGCGCTGCGG CGGTTGCGCG CGGATTCTTC AGCGGCCGCG
CCGGCCGTCG GCACGGTGCG CATCCACCTC GAGGGCACCT GGGCCAACGT GTACCTCGGC
GCCGAGCAGA TCGGGCGTGT GCCGGGCGAG CTAGAGCTGC CGGTGGGGGC GCACACGCTG
CGGCTCGAGA ACCCGGTGAG CCAGCGCTCG TGGCGCCTGC AGGTGCGCGC GCGCGCTGGC
GAGCCGAGCT ACTACCGCGT GCCCGACTGA
 
Protein sequence
MASGIEQLER YELCERIATG GMAEVYLAKA YGAHGFEKTL AVKRILPELA SDLEFEERFI 
AEAKLAVQLS HANIVQVFDF GRVGRTLFLV LEYVDGLDLA ALLGRYRNAG RELPLPAAFQ
IAIEMARGLD FAHRRRVIHR DVSPSNILLS KAGDVKVADF GIAVPDAEHI QQASRRQRIM
GKWRYMSPEQ TRGDDLDTRS DLFALGAIIF ELVTGDKLFS ATESDHIVEQ IHEMDIPDPA
TRRSGVPARL HEVLCRALAR DRNQRFDHAS DLQRVLAQLC HESNIIFSAL EVADAVHAVL
RPEEREDLHS GPRPVPLDGL IRQHLGVASD VGAQRRTSAG SWSREATITG AGDEDDAASE
RADGAEADGS DTALTVPVGA GAHKLRTRAA SDTQRPPTIV KTGAERDGVS IWDYGEDGGD
SGGGGGNDRD SGGEENARAQ RASSSSSSGS GAGAGEGVVG EGGEHASTER LMGESARAGA
TPPAAAASKR GRWALGAGGA ALLFAAVLSY GGLRGELGQS VEIADAGAAS APPRDAEALQ
SGILFINSRP EGAEVLIDGV LQEARTPNVY QVAAREPHRV ELRLGGHAGE IREGVVVGAG
GTAPLRFSLE AMRRPVLVDS EPRGAKVLLD GRRLGETPLA IELSEAEIER IRAGALVLEK
AGYRAEQVEL SEGELHAEDG ASVHIARALR RLRADSSAAA PAVGTVRIHL EGTWANVYLG
AEQIGRVPGE LELPVGAHTL RLENPVSQRS WRLQVRARAG EPSYYRVPD