| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2491 |
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| Symbol | |
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| ID | 8544878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3426934 |
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| End bp | 3430401 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646387191 |
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| Product | Tetratricopeptide repeat protein |
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| Protein accession | YP_003266920 |
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| Protein GI | 262195711 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.694417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAC ACCTCATCGG ATCTGCCATC GCGACCGTGC TCGGCCTGGC GATACTCTCG
CCGCAGGCCG CCGATGCGCA GCGCTACAAG CGTGAGAGCA CGATCAAGCG CATCGACGTC
AAGCAGACGG ACAAGACCAA GAAAATCCAG CCCAAGACCA AGCAGGATCA GCAGGTGCAG
CCGACGCTGA CGGCCGACGA CCTGATCGAG CTGCAGGGCA AGGTTCGCGA GATTCGCAAA
GAGCAGATCC AGCAGTTCGC GCTGCTGATC GAGGACACCG ATCCGGACGA CCCCGAGCGC
CCCGATCTGC TCTTCCGCCT GGCCGAGCTG TACGCGCAGC AGCAGCGCTA CTGGCGCTTC
CGGGCGATGG ACCTGCACGC CGAGATCGAC GCGGCCAAGA CCGCGAAGGA GAAGTCGGCG
CTGAAGCAGA AGCAGGACCA GTACTTCAAG GCCTCGAAGA CCGCGCTCCT GTCGGCGGTC
AAGGTCTACA AGAGCATCGC CGACGACCCG CGCAACCGCA ACTACCCGCG CATGGACGAG
GCGCTCTACT ACTACGCCTA CACGCTCCAG AACGCGGAGT ACGCGAAGGA AGCCCGCCAG
GTCTTCCACA AGCTCATCAA GGATTATCCC AACTCGAAGT ACATCCCCGA CGCCTACCTG
GCGTTCGCCG ATTACTACTT CGCGCAGAAC TCGCTGGCCA ACGCCGAGCA GTTCTACGAC
AAGGTGCTGC AGTTCCCCGA GGCGCGGGTC TACAATTTCG CGCTGTACAA GAAGGGCTGG
GTGTACCTCA ACCTCGACCG GTCCCAGGAC GCGCTCGAGA CCTTCTTCTC GGTCGCCCAG
CGCACCGAGA ACAACGAGCG CCAGGCCATC CTCAACCGCG CGTCGAAGAA GGATTTCGTC
CGCGCGTACG CCGACGTCGG CGTGCCGCAG CGCGCCTACA AGTCGTTCCA GCGGGTCGAT
AAAGACTACG CCTTCGACAT GTTGCAGATC CTCGGCGACA TCTACCTCGA GCAGGGCAAG
GCCGACCGCG CGATCCTGGT GTTCCGCGAG CTCATCGGCC TGCGGCCCAA GCACGAGCGC
GTGTGCGAGT GGGAGTTTAA CGTCGTCCAC GCCATGATGA GCGAGGGCAA CCGCGCGCAG
CAGGTCGACG AGGTCGAGAA CCTGGTCAAG CTGTACAGCG CGTACCGCGA CAAGGACATC
CTGCCCAAGC AGAACCTCGA CGAGTGCCGC GACAACGCCG AGTCGGTCAA CAGCGAGATG
GCCAAGATGT GGCACAACGA GGCCATGAAG ACGCTCGACT TCGAGACCCT GGCCTATGTC
GACCGTCTGT ACCAACTCTA CCTCAACGCC TTCCCCGACT CTCCCGAGCA CGCGGAGATG
CAGTACTACT ACGCCGAGCT GATGTGGACG CGGGCGGAGA AGGAGCAGGA CCAGGCCCGC
GCGGCCAAGC TGTGGGAAGA GGCCGCGATC GCGTTCACCG ACGTGGTCAA GACCAAGCAG
CTCAAGGGGG AGATGCTCAA GGAGGCCGCC TACGCCGCCG TGCTCGGCTG GAAGAACGCG
CTGGCCGTCG ATCCCGACAC CAACGCGCCG CCGCCGCCGA CTGACGAGGA GCTGGCCAAG
ACGCCGGAGC CGCAGGAGAT CCCGGACCGC GAGAGGAAGA TGATCGAGGC TTTCGACATC
TACATCGACT ACGTCAAGGA TCCCAAGGAC GACGAGCTGG TCACGATGAA GTTCCTCAAG
GCCCGCATCT TCTGGCGTTA CAACCAGTTC GATCAGGCGG TGCCGCTGTT TGGCGACATC
CTCGAGAATC ACATTGACCA CGAGACCGCC GAGTTCTCGG CCAACCTGCT GCTCGACACC
CTCAACCGCA GCCGTCGCCA CGACGAGATG CTGGTGTGGG TGGAGCGCCT GTCCAAGGAG
GAGGAGTTCC TCGAGGACAA AGAGGATCTG GCCGAGCGCC TGGCGATTCT GCGCCGGCAG
GGCATGCGCA AAGTCGCCGA GCGCCTCGAG CAGGAGGCCA AGGACTCGGG CGACTTCTCC
AAGTACGTGG ACTGCGGCGA CAAGTACCTC GAGGTCTTCA ACGACAACTC CGAGGCCGAA
GACGCGCCCA TCATTCTGTA CAACGCCGGC GTCTGCTATG AGCAGGGTCG CTCGCTGGGC
GCGGCGATCC AGATGTTCAC CTTCTTGACC AACTTCTTCC CCGACGCGAA CGAGACCAAG
AAGGCCATCG CGCGCCTGGG CTACAACTTC GCCCAGGTGG CCTACTACCG GCAGGCGGCC
GAGCGTCTCG AGGAGTACGC GCGCCGCTTC GGCGGTGAGG ACAACGCGCA CAAGGCGCTG
TGGGACGCGG TGTTCTACCG CAAGGGCGTC GGCGACGACG ACCAGGCCAT CGAGGACACC
AAGTTCTTCA TCCGCCAGTA CGGCCGCAAG AAGCCGACCG AGGCCGCGGA CGCCATGTGG
AGCATGACCT CCATCTACGA GAAGCGCGGT GACTCCGAGG AGATCATCGA CCACCTGCAG
CGCTACCTCA AGCAGTACGG TCGCCAGGGC GGCATCGATC GCCAGGTCAT CGCCCACACC
AAGATCGGCA TGCTGCTGTG GGAGCAGTCG TGCCCGGTGC GCGGCGTCAA TGGCGCCTGC
GTGCGCATCA AGCGCGAGCG CAGCATCGTG AGCAAGGGCA AGCGCAAGAA GCGGGACAGC
TCGCTGCCGA CGCAGTGCGG GCCCGAGTCG AAGATCAACC TGACCATCGT CGAGCGCGAC
CCGCGCAAGG TGCGCTCGGC GCAGCGGGAG TTCCGCGAGG CCATCAAGCT GTTCGCGGGT
GGCAAGGCGG TGCAGCGCAT GCCCGACGGC GACAGCAAGG CGCTGCGCAC CGCGCAGATG
ATCCGCTCCT TTGCCGCGGC CAAGTTCCAC CTGGCCGAGG AGGAGTACGA GTCCTTCCTC
GACACCAAGT TCCCGCGCGG GCTGGATTTC GATCCGCGCA ACGAGCGCAA GGCCAAGAAG
TCGGCCAAGG AGTTCCAGGC CTGGTTCCAG AACAAGATGA AGCTCGGCAC CAAGGCGACC
AAGCTGTTCG ACGAGGTCAA GGACATCACC GGCGGCGGCG CCCACTACGC CATCGCGGCG
GCCGCGCGCA TGGGCCAGAT CAGCCAGAAC TTCTCGGACG CGCTGTTCAC CGCCCAGATC
CCCAACAACG TGCGCACCGG CCAGTTCGCG GAGGACAAAG TCGACGCCTA CTGCGACGAG
CTCACGACCG CGGCCGAGCC GCTCGAGAAT CGTTCGGTCG AGGCCTTTGG CTTCTGCCTC
AACCTCTCGA CCAAGCTCAA CTGGTTCAAC GAGTGGTCGC GGCTGTGTGA GAAGGAGCTG
GGCCAGATTC GTCCGCAGGA ATACCCGACG GCCGCCGAGC TGCGTGGCGT GGCCGATAAC
GTCGCTCCGG TGGTTGCCAC CGAGCCTGCC GTCATCCGGC TCGACTGA
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| Protein sequence | MKRHLIGSAI ATVLGLAILS PQAADAQRYK RESTIKRIDV KQTDKTKKIQ PKTKQDQQVQ
PTLTADDLIE LQGKVREIRK EQIQQFALLI EDTDPDDPER PDLLFRLAEL YAQQQRYWRF
RAMDLHAEID AAKTAKEKSA LKQKQDQYFK ASKTALLSAV KVYKSIADDP RNRNYPRMDE
ALYYYAYTLQ NAEYAKEARQ VFHKLIKDYP NSKYIPDAYL AFADYYFAQN SLANAEQFYD
KVLQFPEARV YNFALYKKGW VYLNLDRSQD ALETFFSVAQ RTENNERQAI LNRASKKDFV
RAYADVGVPQ RAYKSFQRVD KDYAFDMLQI LGDIYLEQGK ADRAILVFRE LIGLRPKHER
VCEWEFNVVH AMMSEGNRAQ QVDEVENLVK LYSAYRDKDI LPKQNLDECR DNAESVNSEM
AKMWHNEAMK TLDFETLAYV DRLYQLYLNA FPDSPEHAEM QYYYAELMWT RAEKEQDQAR
AAKLWEEAAI AFTDVVKTKQ LKGEMLKEAA YAAVLGWKNA LAVDPDTNAP PPPTDEELAK
TPEPQEIPDR ERKMIEAFDI YIDYVKDPKD DELVTMKFLK ARIFWRYNQF DQAVPLFGDI
LENHIDHETA EFSANLLLDT LNRSRRHDEM LVWVERLSKE EEFLEDKEDL AERLAILRRQ
GMRKVAERLE QEAKDSGDFS KYVDCGDKYL EVFNDNSEAE DAPIILYNAG VCYEQGRSLG
AAIQMFTFLT NFFPDANETK KAIARLGYNF AQVAYYRQAA ERLEEYARRF GGEDNAHKAL
WDAVFYRKGV GDDDQAIEDT KFFIRQYGRK KPTEAADAMW SMTSIYEKRG DSEEIIDHLQ
RYLKQYGRQG GIDRQVIAHT KIGMLLWEQS CPVRGVNGAC VRIKRERSIV SKGKRKKRDS
SLPTQCGPES KINLTIVERD PRKVRSAQRE FREAIKLFAG GKAVQRMPDG DSKALRTAQM
IRSFAAAKFH LAEEEYESFL DTKFPRGLDF DPRNERKAKK SAKEFQAWFQ NKMKLGTKAT
KLFDEVKDIT GGGAHYAIAA AARMGQISQN FSDALFTAQI PNNVRTGQFA EDKVDAYCDE
LTTAAEPLEN RSVEAFGFCL NLSTKLNWFN EWSRLCEKEL GQIRPQEYPT AAELRGVADN
VAPVVATEPA VIRLD
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