| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2486 |
|---|
| Symbol | |
|---|
| ID | 8544873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3421424 |
|---|
| End bp | 3422737 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646387186 |
|---|
| Product | tRNA (guanine-N1)-methyltransferase |
|---|
| Protein accession | YP_003266915 |
|---|
| Protein GI | 262195706 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.633084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.330864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGC GCTTTACCGT CGTCACGATT TTTCCCGAGA TGTTCGCGTC GGTCATCGAC
GCCAGCGTCT TTGGCCGCGC GCGGGCGGCC GGTCTGGTGC AGGTCGACTT CATCGACCCG
CGCGACTTCA CCAGCGACCG CCACCGGACC GTGGACGACG CGCCCTATGG CGGCGGCCCC
GGCATGGTCA TGAAGGCCGA GCCCTTGCTC GCGGCCATCG AGGCCGGCTC GCGGGTCGAG
CCGGCGCCGC ACCGCATCTT CCTGACCCCG GCCGGGGCGC CGCTGGCCCA GAAGCGGGTC
ATCGAGCTGG CCGGGCTGCC GCATCTGCTG CTGCTGTGCG GCCGCTACGA GGGCGTGGAT
GAGCGCGTCT CGGAGCTGGG AATCGACGAG GAGATCTCGG TCGGCGACTT CGTGCTCACC
GGCGGCGAGC TCGGCGCCAT GGCGCTGATG GACGCGGTGG CCCGCTACGT CCCCGGCGTG
CTCGGCGAGT CGGCCTCGAC CGACGAGGAG TCGTTCTCCG AAAATCTCCT CGAGTACCCG
CAGTACACGC GCCCTGCGCT GGTTCGCGAG CGCGGGGTGC CCGACATCCT CAACAGCGGC
CACCACGAGC GCATCCGCCA GTGGCGCCGT CAGCAGGCGC TCATGCGCAC CGCCGAGCGC
CGCCCCGATC TGCTCGCGCG CCATCGCTTC AGCGACGAGG ACCGCGCGCT GTGGACGCGC
GAGCCCGGTG CCGATCCCGC CGGCCGCAGC TACGTGGCGC TGGCGCATCA TCCGGTCTAC
GACCGCAACC GGCGCATCGT GACCAGCGCG GTCACCAACT TCGACATCCA CGACATCGCC
CGCTCCACCG CCACCTACGG GCTCGCCGGC TACTTCGCGG TCACCCCGGT AGCCGCCCAG
CGCGAGAAGA TCGACCGCAT CGTGTCGGTC TGGGGCGGGG CCGCGCAGCC GCCGCCGCCC
GGGCAGGACC ACCGCATGGA CGCGCTCTCG CTGGTGCGCA CGGCCGCGGA TCTGGCCGCG
GCGCGCGAGG CCATCGAGCG CGAGCACGGG GCCCCGCCGC TGGTGGTGGC GACCTCGGCG
CGGCGCGGCG AGCGGGCCCT GAGCTTCGCG GCGCTGCGGG CGACCCTGCA CCGCGAGAGC
GAGCGCCCGG TGCTGCTGAT CTTCGGTACC GGCTGGGGGC TGATCGACGA GCTCGTGGCC
GCCGCCGACT ATCTGCTGGT GCCCATCGAG GGCCGCCCGC ACTTCAATCA TCTCAGCGTG
CGCAGCGCGG TCGCCATCAT CCTCGACCGG TTGTTCGGCC AGGAGTTGAG CTGA
|
|---|
| Protein sequence | MSVRFTVVTI FPEMFASVID ASVFGRARAA GLVQVDFIDP RDFTSDRHRT VDDAPYGGGP
GMVMKAEPLL AAIEAGSRVE PAPHRIFLTP AGAPLAQKRV IELAGLPHLL LLCGRYEGVD
ERVSELGIDE EISVGDFVLT GGELGAMALM DAVARYVPGV LGESASTDEE SFSENLLEYP
QYTRPALVRE RGVPDILNSG HHERIRQWRR QQALMRTAER RPDLLARHRF SDEDRALWTR
EPGADPAGRS YVALAHHPVY DRNRRIVTSA VTNFDIHDIA RSTATYGLAG YFAVTPVAAQ
REKIDRIVSV WGGAAQPPPP GQDHRMDALS LVRTAADLAA AREAIEREHG APPLVVATSA
RRGERALSFA ALRATLHRES ERPVLLIFGT GWGLIDELVA AADYLLVPIE GRPHFNHLSV
RSAVAIILDR LFGQELS
|
|---|
| |