| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2479 |
|---|
| Symbol | |
|---|
| ID | 8544866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3414884 |
|---|
| End bp | 3415819 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646387179 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_003266908 |
|---|
| Protein GI | 262195699 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0174052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.17333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCT TCGCGCGCCT CTCCCTGGCG ACCACGCTCG CCACCTATCT GCTCATCGCC
ATCGGAGCGC TCGTGCGCGC GGCCGGCGCC GGCCTCGGCT GCCCGGACTG GCCCAAGTGC
TTCGGTCAGT GGATCCCGCC CATGCGCGCC GAAGAGCTGC CGCCCGGCTT CGATCCCGCG
CAGTTCATCC TCGTCCACAC CTGGCTCGAA TACATCAATC GCCTCATCGG GGTGGTGATC
GGATTTCTCA TCTTCGCCAC GCTGATCTCG GCCTGGCGCA ACCATCGCAA ACAGCCGCGT
ATCGTGTGGC CGACCACGGC CGCGTTCTTG CTCGTCGGCG CCCAGGGCTA TCTCGGCGGA
CAAGTGGTCG AACAAGCGCT GCGCCCGGTG GTGCTCACGG CGCACATGCT GCTGGCGCTC
ATCATCGTCG GCCTGCTGCT GTACGCGCAT CTCGAGTCGC GTTTCCACGT CGACGCCGCG
GCCCGCGACG CCGGCCACGT ACCTGAGCGG GCTCAGCGCC GTCTCGGCAC CATCGGACTC
GGTCTCGGCG TCTTTTTTCT CGTCCAGGTG GGCGTCGGCA CCGCGGTGCG CAGCGAGCTG
CAGCTCCTCG AGCGCGCCGA TGTTCCGCGT GAGAGCTGGC TGCCGCTGGG CTGGTGGCCC
GATCTCGCGC ACCGTCAGCT CGCCGTGCTA GCGCTGCTCG CCTGCGTCGG CCTGGTGTGG
CTCACACGCC GCCTGGCCCC CGCCCACCGC CAGCTCATGC GCTGGAGCCA GGTGCAGCTC
GCGCTGGTCG CGGTGCAGAT CCTCTCGGGC CTGGGCATGG CCTACATCTC GGTGCCGCCG
CCGCTGCAGG TCGTGCATCT GGCGCTCGCC AGCCTGCTCT TCGGCGCCCT GAGCGTCTAC
GTGTTCATCG CCTACCGCGT GCCCGAGCCG GCCTGA
|
|---|
| Protein sequence | MRGFARLSLA TTLATYLLIA IGALVRAAGA GLGCPDWPKC FGQWIPPMRA EELPPGFDPA
QFILVHTWLE YINRLIGVVI GFLIFATLIS AWRNHRKQPR IVWPTTAAFL LVGAQGYLGG
QVVEQALRPV VLTAHMLLAL IIVGLLLYAH LESRFHVDAA ARDAGHVPER AQRRLGTIGL
GLGVFFLVQV GVGTAVRSEL QLLERADVPR ESWLPLGWWP DLAHRQLAVL ALLACVGLVW
LTRRLAPAHR QLMRWSQVQL ALVAVQILSG LGMAYISVPP PLQVVHLALA SLLFGALSVY
VFIAYRVPEP A
|
|---|
| |