Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2468 |
Symbol | |
ID | 8544855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 3401546 |
End bp | 3402409 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646387168 |
Product | Silent information regulator protein Sir2 |
Protein accession | YP_003266897 |
Protein GI | 262195688 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.314621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.223692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGGACG CAACTCTGTC CACCGAGCTG ACGCGTCTCC TCGGCGTGCT CGCCGGACGC CGCGTGGTCG CGCTGACGGG CGCGGGCTGC AGCACGGAAT CCGGCATTCC CGACTACCGC GGCCCCGAGA CCGCACGCCG GGCGCGCAAT CCCATTCAAT ACCGGGCCTT CCTCGGCCGC GCCCACACCC GCCAGCGCTA CTGGGCACGC AGCTTCATCG GCTGGCAGCG GGTGGCGCGG GCGACACCCA ACGGCTGCCA CCACGCGGTG ACCGAGCTCG AGCGCGCGGG CCTGCTGGTC GGCGTCATCA CCCAGAACGT CGATGGCCTG CACCAGGCGG CGGGCAGCGA CCGCGTGGTC GAGCTGCACG GCTCGCTGGC CGAGGTGCGC TGTCTGGCGT GCGACGAGAT CGAGCCGCGG CGCGATTTGC AGATGCGCCT GGCCGCCAGC AATCCCCACT TCGACGCGCT GCCGCTCGAG CACGCGCCCG ACGGCGACGC CGAGCTGGGC GACGACGCGG TGGCCGGCTT CCGCGTGCTC GACTGCCTGC GCTGCCGCGG CGTGCTCAAG CCCAACGTGG TGTTCTTCGG CGAGCACGTG CCCGCCGATG TCACCCGCGC AGCCTGGGAG CTGTTCGACG AGGCCGAGGC GCTGCTGGTG CTGGGCTCGT CGCTCACGGT GTTTTCGGGC TACCGCTTCG TGCGCCGCGC GGCCGAGCGC CAGGTCCCGG TGGCCATCAT CAACCGCGGC CCGACCCGGG GCGACGGAGA GGCAGCCGTG CTGGTCGACG CCGCGCTCGG CCAGGTGATG CCGGCGCTGA GCGCGGCGCT GTTGCGCGCG CCGCGGCTGG GCCCGGGGCG CTGA
|
Protein sequence | MQDATLSTEL TRLLGVLAGR RVVALTGAGC STESGIPDYR GPETARRARN PIQYRAFLGR AHTRQRYWAR SFIGWQRVAR ATPNGCHHAV TELERAGLLV GVITQNVDGL HQAAGSDRVV ELHGSLAEVR CLACDEIEPR RDLQMRLAAS NPHFDALPLE HAPDGDAELG DDAVAGFRVL DCLRCRGVLK PNVVFFGEHV PADVTRAAWE LFDEAEALLV LGSSLTVFSG YRFVRRAAER QVPVAIINRG PTRGDGEAAV LVDAALGQVM PALSAALLRA PRLGPGR
|
| |