Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2463 |
Symbol | |
ID | 8544850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 3396582 |
End bp | 3397070 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646387163 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003266892 |
Protein GI | 262195683 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.400735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.926275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCCT CCCCGATCGC ACTCCTCGCG CCGCCCTGGG CCACCTGGTT CTCGGCGCTA CACACCGCCC AGGCCGCGGC CCGCGAGCAG GCGCTCGACC TGCGCCTGGC CCGCGTGCGC GCGTTCATCG ACGAGCACAG CGACGCCGCC ATCGATCTCG AGGCCATGGC CGCGCACGCG GGCCTGTCGC GCTACCACTT CCTGCGCGCC TTTCGCCGCG CCTACGATGT CACCCCGCAC CAGTACCTCA CCCAGCGCCG CATCGAGCGC GCCAAGGAGC TGCTGATGGG CAGCGACCTG CCGGTCACCG AGGTGTGCTT CGAGGTCGGC TTCCACAGCC TGGGCTCGTT CAGCACCCTG TTCACGCGCC ACGTAGGACA CGCGCCCGGG CGCTATCGCC GGCGCATGTT GGCGTGTCCC GAGCTGCCGC CGCCGGTCGC GATCCCGGCC TGCTTCCTGT CGTTTTTCGG ACGATCGGGC CACTTCTGA
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Protein sequence | MPPSPIALLA PPWATWFSAL HTAQAAAREQ ALDLRLARVR AFIDEHSDAA IDLEAMAAHA GLSRYHFLRA FRRAYDVTPH QYLTQRRIER AKELLMGSDL PVTEVCFEVG FHSLGSFSTL FTRHVGHAPG RYRRRMLACP ELPPPVAIPA CFLSFFGRSG HF
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