Gene Hoch_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2463 
Symbol 
ID8544850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3396582 
End bp3397070 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID646387163 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003266892 
Protein GI262195683 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.400735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.926275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCT CCCCGATCGC ACTCCTCGCG CCGCCCTGGG CCACCTGGTT CTCGGCGCTA 
CACACCGCCC AGGCCGCGGC CCGCGAGCAG GCGCTCGACC TGCGCCTGGC CCGCGTGCGC
GCGTTCATCG ACGAGCACAG CGACGCCGCC ATCGATCTCG AGGCCATGGC CGCGCACGCG
GGCCTGTCGC GCTACCACTT CCTGCGCGCC TTTCGCCGCG CCTACGATGT CACCCCGCAC
CAGTACCTCA CCCAGCGCCG CATCGAGCGC GCCAAGGAGC TGCTGATGGG CAGCGACCTG
CCGGTCACCG AGGTGTGCTT CGAGGTCGGC TTCCACAGCC TGGGCTCGTT CAGCACCCTG
TTCACGCGCC ACGTAGGACA CGCGCCCGGG CGCTATCGCC GGCGCATGTT GGCGTGTCCC
GAGCTGCCGC CGCCGGTCGC GATCCCGGCC TGCTTCCTGT CGTTTTTCGG ACGATCGGGC
CACTTCTGA
 
Protein sequence
MPPSPIALLA PPWATWFSAL HTAQAAAREQ ALDLRLARVR AFIDEHSDAA IDLEAMAAHA 
GLSRYHFLRA FRRAYDVTPH QYLTQRRIER AKELLMGSDL PVTEVCFEVG FHSLGSFSTL
FTRHVGHAPG RYRRRMLACP ELPPPVAIPA CFLSFFGRSG HF