Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2446 |
Symbol | |
ID | 8544833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3375352 |
End bp | 3376032 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646387146 |
Product | transcriptional repressor, LexA family |
Protein accession | YP_003266875 |
Protein GI | 262195666 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.575713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACG CGCTTACATC ACGCCAGCGA GAAATCCTAG ATTTCATCAC CGACTTCATC CAGGAACGGG GCTACCCGCC CACGCTGCGC GAGATTGGCG AGCACTTTGG CATTCGTTCG ACCAACGGGG TCAACGATCA CCTCAAAGCC CTCGAGAAAA AAGGCTATCT CCGCCGCGAA GACCTCAAAT CGCGGGCCAT GTGGCCGGTC CAGGTACCGC CCGAGCACGA GACCGAGAAC CGCGGCAAGG TCATCCCGCT GCGCAAGAAC GTCGAGGAGG ATGCGGTCGT CGATATCCCC ATCCTGGGCC GCGTCGCCGC CGGGCTGCCG ATCCTGGCGG TGGAGAACGT CGAGGATCGC GTGCGCGTGG ATCGCTTCTT CCTGGGCACG CCGCCGCAGC AGCTCTTCGG CCTGCGCGTG GTCGGCGAGT CGATGATCGA GGACGGCATC CTCGACGGCG ACTATGTCTT CGTCAAGAAG ACGCCGACCG CCCAGCCCGG CGACATCGTG GTCGCCATGA TCGAGGAGGA GGCCACGGTC AAGCGCTACT ACCCCGAGCG CGACTCCATC CGCTTCGAGC CAGCCAACTC GAACATGCGG CCCATCGTGG TCAAGAAGAG TGATTTTCGC GCTGTCGATC TGCTTGGCGT GGTGGTCGGG GTCTATCGTA AGCTCCGCTG A
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Protein sequence | MPDALTSRQR EILDFITDFI QERGYPPTLR EIGEHFGIRS TNGVNDHLKA LEKKGYLRRE DLKSRAMWPV QVPPEHETEN RGKVIPLRKN VEEDAVVDIP ILGRVAAGLP ILAVENVEDR VRVDRFFLGT PPQQLFGLRV VGESMIEDGI LDGDYVFVKK TPTAQPGDIV VAMIEEEATV KRYYPERDSI RFEPANSNMR PIVVKKSDFR AVDLLGVVVG VYRKLR
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