| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2438 |
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| Symbol | |
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| ID | 8544824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3367949 |
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| End bp | 3368824 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646387137 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_003266868 |
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| Protein GI | 262195659 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.220136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.277798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTCG AAGGTGCAAT GACTGCCCTG GTTACTCCCA TGCGCTCCGA GAGCGTGGAT
TACGACGCGC TCGGCACGCT GGTCGAGGCG CAGCTCGCGG CCGGCATCGA CGCCCTGGTC
GCGGTCGGCA CCACCGGCGA GTCGGCGACG CTCGACATGG AGGAGCACAC CGAGGTCATT
CGCTTCGTGG TCAAGGCGGC CGCGGGTCGG GTGCCCGTCA TCGCCGGCGC CGGCGGCAAC
GCGACCGCCG AGGCGCTGTC GCTCACGCGC GCCAGCGAGG CGGCCGGCGC CGATGCCCTG
CTGCAGGTCG TGCCGTACTA CAACAAGCCG ACGCAGGAGG GCATGTTCCG CCACTTCTCG
GCCATCGCCG GAGCGACCGA GCTGCCCATC GTGCTGTACA ACGTGCCCGG TCGCACGGTC
AGCGATCTCC TGCCCGAGAC CGTGGCGCGC CTGGCCGAGA TCGACAACGT GGTGGCGATC
AAAGAGGCCA CCGGCAGCGT CGTACGGGCG ACCGAAATCA TCGAGCTGTG CGGCGACGCC
ATCGCGGTGC TCTCGGGCGA CGACTTCACC TCGTTCCCGC TGTACTCGGT GGGCTCGCGC
GGCGTGATCT CGGTGGTCTC GAACGTCATG CCCGACGCCA TGGCCGAGAT GTGGGACGCG
GTGGTGGCCG GCGATTGGGC GCAGGCGCGC GCGCTGCACT ACAAGATCCA GCCGATGACG
CGCCTGCTCT TCGCCGAGAG CAATCCGGTG CCGGCCAAGA CCGCGCTGGC GCTGCTCGGC
ATGATGCAGC CCGACGCGCG GCTGCCGCTG GCGCCGTGCA CCGACGAGCT GCGCGAGCGG
CTGCGCGCCC AGCTCAATAC CGAGGGCATG CTTTGA
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| Protein sequence | MKLEGAMTAL VTPMRSESVD YDALGTLVEA QLAAGIDALV AVGTTGESAT LDMEEHTEVI
RFVVKAAAGR VPVIAGAGGN ATAEALSLTR ASEAAGADAL LQVVPYYNKP TQEGMFRHFS
AIAGATELPI VLYNVPGRTV SDLLPETVAR LAEIDNVVAI KEATGSVVRA TEIIELCGDA
IAVLSGDDFT SFPLYSVGSR GVISVVSNVM PDAMAEMWDA VVAGDWAQAR ALHYKIQPMT
RLLFAESNPV PAKTALALLG MMQPDARLPL APCTDELRER LRAQLNTEGM L
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