Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2434 |
Symbol | |
ID | 8544820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3362032 |
End bp | 3363555 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646387133 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003266864 |
Protein GI | 262195655 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.497623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGCGC CGAAGCGGCT CGAGCGCGAC GCCGAGCCAA GCTCTGGCGC CGCTCGGGTG ACGCCCTCTG CGGCTACGCC GCGTCGCTTC GCCTGGCTGA TCGCTGCGCT CGTGTGCTCG TCGCCGCTGG CGGCGCATGC GCAGTCGGCC GCGATCGATA TCACCCGCTT CCACCCCGCA CCCGGCTCGG GTCGCATCAT GGCGACCGAG CTGGCCGAGG TCGGGCCCGA TCTCCAGATC GTGCCGCAGC TCTTCTTCCA CTACGCCAAG GACCCGATGT TGTTCACCCA GGGCGGCGAG CCGGTGGCGA CCTCGGTGCG CAACCGCTTC ACCGGTGAGC TGTCGCTGGC CCTGGCCTTG GCCGAGCGCT ACCAGGTGGG CCTGGCGCTG CCGGTGACCG TGTTTCAGTC GGGCGACGAG CTCGACATCA TGCCCGGCTT CGAGGACGTG AGCCCGCCCA GCGAGCTCAC CCAGAGCGGC ATCGAGGACG TGCGCCTGTC GGCCAAGGGC CTGCTGTGGG AGGATCGCGA GCAGGGCTAC GCGCTCGGCG CCAGCGGACA TCTCACCTTT CAAACCGGCG ACGACCAGGG CTTCATGAGC TCGGGCGGGC CGACCTTTGA TCTGCGCCTG CTCGGCAGCA TGCGCCGCGA TCGCCTGGCC GTGGGCGTCA ACCTGGGCTG GCTGTTCGCG GGCGAGGAGC AGGTCTTCGC CACCCACACC GGCATGGGCG TGAGCTTCGG CGTGGGCGCG CAGTACGACG TGCTCGACTA CGACAGCGGC ACCCTGGCCG TGGGCGCCGA ACTCTACGGC CTGGCCCACA ACTTCTTCGA CGACAGCCGC GAGATCCCGA TCGAGCTGCT GGTCTCGGGC AAGGCCAGCG TGCACACCTG GACCTTCTTC CTGGGCGCCG GGCCGGGTCT GACCCGCGGC TACGGCGAGC CCGACGTGCG CGTGCTGGCG GGCGTGAGCT TCGCCTGGGA TCCCACCATG CTGCCGCCGC CGCCGCCGCC GCCGCCGCCC GCGCCTCCCG AGCCGGAGCC CGAGCCGCAG CCCGAGCCGC CGCCGCCGCC GCCGCAGCCC GAGGGCCAGC AGTGGGTCGA CAACACCCTG GTGCTGCTGT CGAACGTGCT CTTCGGCTAC GACAAGTGCG CGCTCAGCGA GCAGAGTCAC GACTCGCTGC GCGAGGTCGC GATGACGCTG CAGCAGCATC CCGAGTGGGG TCAGATCCGC ATCGAGGGAC ACGCGTCCCA AGAGGGCAAG CCGGAGTACA ACCTGCGGCT GTCGAGCTGT CGCGCCATGG CGGTGCGCAA GTTCCTCATC GCCAACGGCG TGGCCGCGGA GCGGCTGCAG TCGCTCGGCT TCGGCGACAC CTGTCCCAAG TTCTCCACCG GCACGCCCGA GGAGATGCAG CAGAATCGGC GCGTGGAGTT CATCCGCGAT CCCGCCAACA ACCCGCCGCG CTGCGAGGTT CCCGCGCAGC TCAAGCCGCT GTTCAAGCAT CTGCAAGAGA TCGGGGAGAA TTGA
|
Protein sequence | MHAPKRLERD AEPSSGAARV TPSAATPRRF AWLIAALVCS SPLAAHAQSA AIDITRFHPA PGSGRIMATE LAEVGPDLQI VPQLFFHYAK DPMLFTQGGE PVATSVRNRF TGELSLALAL AERYQVGLAL PVTVFQSGDE LDIMPGFEDV SPPSELTQSG IEDVRLSAKG LLWEDREQGY ALGASGHLTF QTGDDQGFMS SGGPTFDLRL LGSMRRDRLA VGVNLGWLFA GEEQVFATHT GMGVSFGVGA QYDVLDYDSG TLAVGAELYG LAHNFFDDSR EIPIELLVSG KASVHTWTFF LGAGPGLTRG YGEPDVRVLA GVSFAWDPTM LPPPPPPPPP APPEPEPEPQ PEPPPPPPQP EGQQWVDNTL VLLSNVLFGY DKCALSEQSH DSLREVAMTL QQHPEWGQIR IEGHASQEGK PEYNLRLSSC RAMAVRKFLI ANGVAAERLQ SLGFGDTCPK FSTGTPEEMQ QNRRVEFIRD PANNPPRCEV PAQLKPLFKH LQEIGEN
|
| |