Gene Hoch_2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2434 
Symbol 
ID8544820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3362032 
End bp3363555 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content70% 
IMG OID646387133 
ProductOmpA/MotB domain protein 
Protein accessionYP_003266864 
Protein GI262195655 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.497623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGC CGAAGCGGCT CGAGCGCGAC GCCGAGCCAA GCTCTGGCGC CGCTCGGGTG 
ACGCCCTCTG CGGCTACGCC GCGTCGCTTC GCCTGGCTGA TCGCTGCGCT CGTGTGCTCG
TCGCCGCTGG CGGCGCATGC GCAGTCGGCC GCGATCGATA TCACCCGCTT CCACCCCGCA
CCCGGCTCGG GTCGCATCAT GGCGACCGAG CTGGCCGAGG TCGGGCCCGA TCTCCAGATC
GTGCCGCAGC TCTTCTTCCA CTACGCCAAG GACCCGATGT TGTTCACCCA GGGCGGCGAG
CCGGTGGCGA CCTCGGTGCG CAACCGCTTC ACCGGTGAGC TGTCGCTGGC CCTGGCCTTG
GCCGAGCGCT ACCAGGTGGG CCTGGCGCTG CCGGTGACCG TGTTTCAGTC GGGCGACGAG
CTCGACATCA TGCCCGGCTT CGAGGACGTG AGCCCGCCCA GCGAGCTCAC CCAGAGCGGC
ATCGAGGACG TGCGCCTGTC GGCCAAGGGC CTGCTGTGGG AGGATCGCGA GCAGGGCTAC
GCGCTCGGCG CCAGCGGACA TCTCACCTTT CAAACCGGCG ACGACCAGGG CTTCATGAGC
TCGGGCGGGC CGACCTTTGA TCTGCGCCTG CTCGGCAGCA TGCGCCGCGA TCGCCTGGCC
GTGGGCGTCA ACCTGGGCTG GCTGTTCGCG GGCGAGGAGC AGGTCTTCGC CACCCACACC
GGCATGGGCG TGAGCTTCGG CGTGGGCGCG CAGTACGACG TGCTCGACTA CGACAGCGGC
ACCCTGGCCG TGGGCGCCGA ACTCTACGGC CTGGCCCACA ACTTCTTCGA CGACAGCCGC
GAGATCCCGA TCGAGCTGCT GGTCTCGGGC AAGGCCAGCG TGCACACCTG GACCTTCTTC
CTGGGCGCCG GGCCGGGTCT GACCCGCGGC TACGGCGAGC CCGACGTGCG CGTGCTGGCG
GGCGTGAGCT TCGCCTGGGA TCCCACCATG CTGCCGCCGC CGCCGCCGCC GCCGCCGCCC
GCGCCTCCCG AGCCGGAGCC CGAGCCGCAG CCCGAGCCGC CGCCGCCGCC GCCGCAGCCC
GAGGGCCAGC AGTGGGTCGA CAACACCCTG GTGCTGCTGT CGAACGTGCT CTTCGGCTAC
GACAAGTGCG CGCTCAGCGA GCAGAGTCAC GACTCGCTGC GCGAGGTCGC GATGACGCTG
CAGCAGCATC CCGAGTGGGG TCAGATCCGC ATCGAGGGAC ACGCGTCCCA AGAGGGCAAG
CCGGAGTACA ACCTGCGGCT GTCGAGCTGT CGCGCCATGG CGGTGCGCAA GTTCCTCATC
GCCAACGGCG TGGCCGCGGA GCGGCTGCAG TCGCTCGGCT TCGGCGACAC CTGTCCCAAG
TTCTCCACCG GCACGCCCGA GGAGATGCAG CAGAATCGGC GCGTGGAGTT CATCCGCGAT
CCCGCCAACA ACCCGCCGCG CTGCGAGGTT CCCGCGCAGC TCAAGCCGCT GTTCAAGCAT
CTGCAAGAGA TCGGGGAGAA TTGA
 
Protein sequence
MHAPKRLERD AEPSSGAARV TPSAATPRRF AWLIAALVCS SPLAAHAQSA AIDITRFHPA 
PGSGRIMATE LAEVGPDLQI VPQLFFHYAK DPMLFTQGGE PVATSVRNRF TGELSLALAL
AERYQVGLAL PVTVFQSGDE LDIMPGFEDV SPPSELTQSG IEDVRLSAKG LLWEDREQGY
ALGASGHLTF QTGDDQGFMS SGGPTFDLRL LGSMRRDRLA VGVNLGWLFA GEEQVFATHT
GMGVSFGVGA QYDVLDYDSG TLAVGAELYG LAHNFFDDSR EIPIELLVSG KASVHTWTFF
LGAGPGLTRG YGEPDVRVLA GVSFAWDPTM LPPPPPPPPP APPEPEPEPQ PEPPPPPPQP
EGQQWVDNTL VLLSNVLFGY DKCALSEQSH DSLREVAMTL QQHPEWGQIR IEGHASQEGK
PEYNLRLSSC RAMAVRKFLI ANGVAAERLQ SLGFGDTCPK FSTGTPEEMQ QNRRVEFIRD
PANNPPRCEV PAQLKPLFKH LQEIGEN