Gene Hoch_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2429 
Symbol 
ID8544815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3355414 
End bp3357177 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content76% 
IMG OID646387128 
Producthypothetical protein 
Protein accessionYP_003266859 
Protein GI262195650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.505611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGCGC TGAGCGCGGC GCTGCTGGCC GCTGGCTGCG GCTTCGAGGT GGACGAGTTG 
CCGGCGTGCC CGGGCCAGCT TTTGCCCGGC GCCGTGGTGA TCACCGAGCT GATGCGTGCC
CCGGAAGAGT CCGGCACGTC GTGGATCGAG GTCGCCAATC CCGGCGATGC GCCGGCGGCA
TTGCGCGGCA CCGTGCTCGA GGTCGCCGAT GCCGAGGGGC GGGTGGTGGC GCAGCACGTG
GTGACTTCGC TGGTGGTGCC AGCGGGCGCG TACGCTGTGC TGGGGCGCGA GGACGCCGGG
TTTGTCGACT ACGTGTACGG AGCCGATCTC GACGCCTGGA GCGCGGCGCG CGGCTCGGAG
GCGGCGGCCG GCGACGGCGA TGGCGACGGC GCGGAGGACG GCGCGGCCGG GCAGGTGAGC
CTGCGCTGCG ACGTCATCGC GGTCGACACC GCGGCGCATC CGCGGTCGCC GCCGGGCGTG
GCGGTCGGGC TCGGCGCGCA GCTCGGCGTC GACGCCGAGG CCAACGACGA GCGCGACAAC
TGGTGTGTGT CCGCGGCGGG TGCCGACGCG CTCGCGAACG GTGCCGAGGC GTTCGCGGGC
ACCCCGGGCG CGGCCAATGG CGAGTGCGCG GGCGCCCCGG GCGCGCCCGA TGGCCCCGGC
GTGCCCGAGA CCTGCGCCGA TGGCGAGCTG CGGCGCGCGC CGCTGGCGCC GGCCGCTGGC
GACCTGGTCA TCACCGAGAT CATGGCCAAC CCGGCCGCCG TCGCCGACGC CAGCGGCGAG
TGGTTCGAGG TGTTTGCCGT CCGCGGTGTC GATCTCGTCG GCCTGGAAAT CGGACGGTCG
GTCGATGACA CCGCGGCGGT CTTTGCCGAT GACGCCTGCC GGCCGGTGAG CGCGGGCGCG
CGCCTGGTGT TCGCGGCCAG CGCCGACAGC GGCGAAAACG GCGGCCTCGC CGCGGTCTCC
GGCACCTTCT CGGTGTCGCT GGGCAACAGC GGCGGCGCGC TGGCGCTGGC GCACGGCGGC
GCGCTCGTCG ACGCCGTGAG CTGGGACAGT GCACCCAGCG GCGCCTCGCT GGCGCTCGCG
TCCGGGCATC ATTCGGCCGA GGCCAACGAC CTGGGCGCGC ACTGGTGCGA GAGTCCGGAT
GCGTCGCCCG GTCTGCTCGA TCGCGGCTCG CCCGGCCTGC CCAATCCCGC ATGTGCGCAG
GGCGAGGCGC CCGGCGACCC CGAGCTGCCG GCGGCGAGCT GTATCGAGGC CGGCAGCCCG
CGCGCGGTGC GCGTGCCCGC GGCCGGCACC GTGCGCATCA CCGAGGTGAT GGCCGACCCC
GCCGCCGTGG CCGACAGCGA GGGCGAGTGG ATCGAGCTGC GCTTCGACGC CGACGCCGAT
CTCAACGGCC TGCAGCTCGG CAAGCAGCCG GGCCAGCCGC TGATGACGAT CGCGTCTGAG
GACTGTCTGC CCGTGGCCGC CGGCGACTAC GCGGTGCTGG CGCGCAGCGC GCCCGCGGCG
CTCAACGGCG GGCTGCCGCG CGTGGACGCG GTCTTCGACT TCGGCCTGGT CAACAGCGGC
GGCAGCCTGT TCGCGGCCGC AGGCGGGGCC ACGCTCGACA GCATCGCGCA CGGCGCCGCC
CAGGCCGGAG CCGCGACCAG CCTCGACGAA GACGATGGCC TGCGTTGGTG CGCGGCCGCC
GATGACAGCG CGTACGGCAG CGGCGACCGC GGCACGCCGG GCGCGGCCAA TCCCGCGTGT
CCCGAAACCG CCGCGGCGCC GTGA
 
Protein sequence
MAALSAALLA AGCGFEVDEL PACPGQLLPG AVVITELMRA PEESGTSWIE VANPGDAPAA 
LRGTVLEVAD AEGRVVAQHV VTSLVVPAGA YAVLGREDAG FVDYVYGADL DAWSAARGSE
AAAGDGDGDG AEDGAAGQVS LRCDVIAVDT AAHPRSPPGV AVGLGAQLGV DAEANDERDN
WCVSAAGADA LANGAEAFAG TPGAANGECA GAPGAPDGPG VPETCADGEL RRAPLAPAAG
DLVITEIMAN PAAVADASGE WFEVFAVRGV DLVGLEIGRS VDDTAAVFAD DACRPVSAGA
RLVFAASADS GENGGLAAVS GTFSVSLGNS GGALALAHGG ALVDAVSWDS APSGASLALA
SGHHSAEAND LGAHWCESPD ASPGLLDRGS PGLPNPACAQ GEAPGDPELP AASCIEAGSP
RAVRVPAAGT VRITEVMADP AAVADSEGEW IELRFDADAD LNGLQLGKQP GQPLMTIASE
DCLPVAAGDY AVLARSAPAA LNGGLPRVDA VFDFGLVNSG GSLFAAAGGA TLDSIAHGAA
QAGAATSLDE DDGLRWCAAA DDSAYGSGDR GTPGAANPAC PETAAAP