| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2421 |
|---|
| Symbol | |
|---|
| ID | 8544807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3349155 |
|---|
| End bp | 3349943 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646387120 |
|---|
| Product | cytochrome c oxidase subunit III |
|---|
| Protein accession | YP_003266851 |
|---|
| Protein GI | 262195642 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0162196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.448728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG CCGCCTCGCA TTCCAGCCAC GATGACCACG GACACCACGG GTCACCGTTC
ATCCAGCACC ATTTCAACGA CGCCGAGCAC CAGTTCGATT CCGGCAAGTT CGGTATCTGG
TTGTTCCTGG TGCAGGAGAT TCTGTTTTTC TCGGCGCTGT TCGTCGCCTA CATCGTCTAT
CGGACGCAGC ACCCCGAGAT CTTCCTGTAC GGCAGTCACT ACCTCGACAC CACGATGGGC
GCCATCAACA CCGGCGTGCT CATCCTCAGT AGTTTCACCG CCGCCATGGC CGTGCGCTGC
GCCCAGCTCG GGCAGAAAAA AGCGCTCATC GGCTGCCTGT TGATCACGCT GCTGTGTGCC
TTCGGCTTCC TGGGCATCAA GTACGTCGAG TACTCGCACA AGATCCATAC CGGCACGCTG
TTCGGCGCCA GCTTCAACCC GTGCACGACT CCCGAGGGCG CGCTGCTGCG CCCGGACGAG
CCGGAGTGCG TGAAAGAGGC GATGGCGCTC TCGGGTGTGG CGGACGCGAG CGAGGTGAGG
ATGGCGACGG AGGCCGAAAA ACCTCCGGCG AACACCAACA TGTTCTTCAC CATCTACTTC
GCGATGACGG GTCTGCACGG TATCCACGTG CTCGCCGGCA TCATCGTGTT CTTCTGGTTG
CTATTCCGCG CGGTGAAGGG CCATTTCACA CCCGACTACT ATGGGCCTGT GGATTTCGCG
GCCCTGTACT GGCATCTCGT GGACCTGATA TGGATTTTCC TCTTCCCGCT GTTCTATTTG
ATCGACTGA
|
|---|
| Protein sequence | MSEAASHSSH DDHGHHGSPF IQHHFNDAEH QFDSGKFGIW LFLVQEILFF SALFVAYIVY
RTQHPEIFLY GSHYLDTTMG AINTGVLILS SFTAAMAVRC AQLGQKKALI GCLLITLLCA
FGFLGIKYVE YSHKIHTGTL FGASFNPCTT PEGALLRPDE PECVKEAMAL SGVADASEVR
MATEAEKPPA NTNMFFTIYF AMTGLHGIHV LAGIIVFFWL LFRAVKGHFT PDYYGPVDFA
ALYWHLVDLI WIFLFPLFYL ID
|
|---|
| |