Gene Hoch_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2412 
Symbol 
ID8544798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3336305 
End bp3336952 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content64% 
IMG OID646387111 
Productcytochrome c family protein 
Protein accessionYP_003266842 
Protein GI262195633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.163467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.409257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAT TCGTTTTTCC TGAGTGGACA GAGACTTTTA AGAAGTGGCT TGGCTTGCTG 
GTAATCGGCG CGCCGGTCTA CATCGTGGCG CTGGCCGCCT ACGGCGTTGA GCCGGAGGCG
ATTCGCATCG GCTACCAGCC GGAGCAGCCG GTGCCCTACA GCCACGCGCT GCACGTGGGC
GAGCTCGGCA TGGATTGTCG CTACTGTCAC AACACTGTGG ACAGAGCGGC CCACGCCGCT
ATTCCCCCGT CGGCCACGTG CATGAATTGC CACACCGGCA TTCATCCCGA CAGCCCCCGG
CTTTTGCCGG TGCGCGAGTC GTTCTCGCAA GAGACGCCGC TGTCGTGGGT GCGCGTGCAC
GACCTGCCCG ACTACGTGTA CTTCAACCAC AGCGCCCACG TGACGCGCGG CGTCGGCTGC
GTGTCGTGCC ACGGCCGCGT GGACCTGATG ACCGAGGTCT ACCAGGCCGA GTCGCTGAAC
ATGGAGTGGT GCCTCTCGTG CCACCGCGAT CCGACTCCGC ATCTGCGGCC GCCGGATCAG
GTCACCAACA TGAATTACGA GGTCGAGGAC CAGCGCGCCG TTGGGCTCGA GCTCGCCAAG
CAGAATAGCA TCCTGCCACC GACGGACTGT TCGACATGTC ATCGCTAG
 
Protein sequence
MARFVFPEWT ETFKKWLGLL VIGAPVYIVA LAAYGVEPEA IRIGYQPEQP VPYSHALHVG 
ELGMDCRYCH NTVDRAAHAA IPPSATCMNC HTGIHPDSPR LLPVRESFSQ ETPLSWVRVH
DLPDYVYFNH SAHVTRGVGC VSCHGRVDLM TEVYQAESLN MEWCLSCHRD PTPHLRPPDQ
VTNMNYEVED QRAVGLELAK QNSILPPTDC STCHR