| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2398 |
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| Symbol | |
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| ID | 8544784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3320605 |
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| End bp | 3322338 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646387097 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_003266828 |
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| Protein GI | 262195619 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.924128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.955687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTTCCA CCTGGACCAT CCGTACGGTC GACGCGACCA CGGTGAGTTC GCTGGCCGCG
GGATTGGGCG TCAGCGAGAT CACGGCTCGC TGTCTGGCCG GACGCGGCAT CGCCGACGCC
AGCAGCGCGC GCTCCTACCT GGCGCCGCGG CTCAATCAGT TGCGGCCGCC CGTCGGCCTC
ACCGGCCTGA GCACGGCCGT AGAGCGGCTG GCGCGGGCCG TCAGCCAAGG CGAGCGCATC
GGCATCTTCG GCGACTACGA CGTCGATGGC GTGACCACGG CCGCGCTCAT GGCCAGCTTC
CTCGAGCAGC TCGGCGCCTC GTGTGTGCCG CGGGTGGCGC GGCGTGACGC CGGCTATGGC
TTCGGCAGCG CCGAGGCCGA CGCCATGGCC AGCGCCGGCT GTCGCGTGAT CATCACCGGC
GACTGCGGCA CCAGCGACAT CGACGCCATC GAGCGCGCGG CCGCGCGCGG CGTCGACGTC
ATCGTGGTCG ACCACCACAC CGTGCCCAGC GCGACCGAGC AGCATCCCGC GCTGGCGCTG
GTCAATCCGC TGCGCGCGGA CTCGACCTTC CCCTTCCGCG CCATGGCCTC GGTAGGGCTG
GCGTTCTACC TCATGGCCGC GCTGCGCACC GAGCTGAGCG GCCGCGGCTA CTTCCGCAGC
GGCCGCGAGA TGCCCGACCT GCGCGAGCTG CTCGACCTGG TCGCCCTGGG CACCGTGGCC
GACCTGGTGC CGCTGCAGGG CGAGAACCGC ATCCTGGCGG CGACCGGCCT GCAGTACCTG
GCGCAGGGCC GACGCCCCGG CGTCGCCGCG CTGATGGCGC TGGCCAAGGT CGGCGGCGAT
CGCGGCATCG ACGAGCGCGC CATCGGCTGG CGCCTGGGGC CGCGGCTCAA CGCGCCCGGA
CGCATGGGCG ACGCGGCGCC GGCGCTGTCG CTGCTGCTGG CGCGCGATGC CGCCGAGGCC
GAGCACTGGG CGGCTCAGGT CGAGGACGCC AACGAGCGCC GGCGCGCGGC GCAGGCCGAG
GTCTGGGAGC AGGTGCTGGG TATGCTGCCG AGCGCCGATC CCGGCCCCGC CGTGGTCGTG
GCCGGCGACG GCTGGCCCAG CGGCATCACC GGCATCGTCG CCTCCAAGCT CAACGAGATG
TTCGAGCGGC CGTCCTTTGT CATCGCCGTG GACCCGGTCA GCGGCCTGGC GCGCGGCTCC
GGTCGGGCGC CCAAGGGCTT TCATCTGTGC GAGATCCTGG CCCGCTGCGA CAGCCACCTG
GTGCGCTTTG GTGGCCACGC CGGCGCCGCC GGACTCACCG CTGAGGCCGG GCGGGTCGAG
GCGCTGCGCG AGGCGCTGAG CGCGGCGGTG GCCGAGGCCA GCGCGGACGG CGACGAGGGC
GGCGCAGGCC GAGGCTCACT GATCGACGCC GAAGTAGATC TCGGACAGGT GGACGAATCC
CTGTGCCGCG AGCTCGGTCA GCTCTCGCCC TTTGGTCAGG GCAACGAGAA ACCGCTGCTC
GGCTGCCGCG GCATGCGCGT GCGCACCACC CGGCGGGTCG GCGGCGATGG CTCGCATCTC
AAGCTCGAGT TCGAAGATCG CCAGGGCCGG GCGCTGAGCG GTATCGCGTT TGGCTGGGGC
GAGCGCGACC CGGGCGCGGG CGCGACCATC GACGCGACCT TTGTGCCGTC GATCAACGTG
TGGCGCGGCG AGAGCCGTGT CGAGCTCGAG ATCCAGCACC TCGCGGGCCG CTGA
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| Protein sequence | MTSTWTIRTV DATTVSSLAA GLGVSEITAR CLAGRGIADA SSARSYLAPR LNQLRPPVGL
TGLSTAVERL ARAVSQGERI GIFGDYDVDG VTTAALMASF LEQLGASCVP RVARRDAGYG
FGSAEADAMA SAGCRVIITG DCGTSDIDAI ERAAARGVDV IVVDHHTVPS ATEQHPALAL
VNPLRADSTF PFRAMASVGL AFYLMAALRT ELSGRGYFRS GREMPDLREL LDLVALGTVA
DLVPLQGENR ILAATGLQYL AQGRRPGVAA LMALAKVGGD RGIDERAIGW RLGPRLNAPG
RMGDAAPALS LLLARDAAEA EHWAAQVEDA NERRRAAQAE VWEQVLGMLP SADPGPAVVV
AGDGWPSGIT GIVASKLNEM FERPSFVIAV DPVSGLARGS GRAPKGFHLC EILARCDSHL
VRFGGHAGAA GLTAEAGRVE ALREALSAAV AEASADGDEG GAGRGSLIDA EVDLGQVDES
LCRELGQLSP FGQGNEKPLL GCRGMRVRTT RRVGGDGSHL KLEFEDRQGR ALSGIAFGWG
ERDPGAGATI DATFVPSINV WRGESRVELE IQHLAGR
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