| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2385 |
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| Symbol | |
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| ID | 8544771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3302310 |
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| End bp | 3303938 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646387084 |
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| Product | protein of unknown function UPF0118 |
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| Protein accession | YP_003266815 |
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| Protein GI | 262195606 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.322706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA ACGAGCCGCC TTCCCGAACC GAGCCCGCCG AGGCGGGCGT ACCCGAGGAG
TCGGGCGACA GTCCGTCGAG TGGGCCGTCG AGCGGCGTGC CCAGCACGCC CATGCCGGGC
ACGCCCAGCA GTCCCCACCC CGAGGCCGCG AGCGAGCCCG GGCGCGCGTC CGAAGCCGCG
GGGATGAGCA GCGGCGCGCG CTACGGCGCG CCCAGCGGAC CGCTCGGCGG CGTGCTCAGC
GAGCCCTCGC GCGGCGTCCG CCGGGTGGCC GTGGAGCTGG GAAGCTGGCT CCGGCGGCTC
GCCCGGCTGT GGGGCTTTTT GGCCTTTGCT GTGCTGGTCG TGGTGCTCAC GCGCCACGTG
ATCCTGCCCT TTGTCTTCGC GCTGCTGCTC GCCTTCATCC TCGCGCCCGT GGTGCGCTAC
CTCTCGCACC GCGACGACGG CAGTCAGCGC ATGCCGCGCT GGGTGGCCAT CGTGCTGTGC
TATCTGGTCT TCCTCGGCGT GCTGGTGTCC AGCGCGGCCC TGGTGCTGCC GCGGTTTTCG
GACGACGCGT CGCGTATCGG GGCCAACCTG CCCACGCTCT ACGAGCGCGT CAACGACGAG
TGGGCGCCGG CGTTGGCCGA GTGGCTCGAG AGCAATTTTC CCGCCGACGA GGGCGTCAAA
CCGCTGCACG AGGAGGTGGT CACACCCGGA CAGTCGGTCT ATTTACCGCC CGACACCGCC
TTCGTGCTCA CGCCGCTCGA CGATGGCCGC CTGGCCGTGG AGCTGCCGCC CGGCAGCCTG
TCGATGCTGC CGCGGCCCGA CGGCGGCTTC GAGCTGCGCT CGGGCGAGCC GCCGGCCGAG
AGCGTCGACC TCGAGACCCG CATCCGGCTG TGGACCAGCC AGCGCATCGA GAACCTGCAG
ACCAGCATCG GCGACCTGGT GAGCTTCGGC CAGTCGCTGA TGATCGGTCT GGCGCGCAGC
GTCTTCACCT TCTTCCTGGT GATGATGGTC GGCGCCTTCA TCCTCCTCGA CCTCGAGAAG
CTGCACGGCT TCGCGCGCAG CTTGATCCCC ATGGCCTACC GCGACGACTT CGACCTCATC
GCCAAGGGCA TCAACCGCGG CCTCTCGGGC GTGATCCGCG GCCAGCTCAT CATCTGTCTG
GTCAACGGTG TGCTCACGTA CATCGGCCTG TTCATCTTCA ACGTCGAATA CGCGCTGGTG
CTCGCGCTGG TCGCCGGGAT CATGAGCGTG GTGCCCATCT TCGGGTCGAT CCTGTCGACC
ATCCCCGTCG TCATCGTCGC GCTGTTCTCG GGCGAGGGCG GGCTCGACGT CGCCCGCGCG
CTGGCTGCCT TCGCCTGGAT CGTGGGGATC CACCTGCTCG AGGCCAACGT CCTCGACCCC
AAGATCATGA GCTCGGCCGC GCGCATCCAC CCGGTGCTGG TCATCTTCGC GCTCATCGTC
GGCGAGCACT ACTTCGGCCT CGTCGGCGCG ATCCTGGCGG TGCCCGTGAC CTCGATGGTG
CAGGTGCTGT TCATGTATTT CCGCCGCAAG GCGTGGAAAC TCGACGCCGA GATGGCGCGC
GTGGAGCGCC GCGTCGAACG GCGCCTGAGC CGGCGCTATC GCCGCAGCAG CGACGCCGGA
CCGCGCTGA
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| Protein sequence | MSANEPPSRT EPAEAGVPEE SGDSPSSGPS SGVPSTPMPG TPSSPHPEAA SEPGRASEAA
GMSSGARYGA PSGPLGGVLS EPSRGVRRVA VELGSWLRRL ARLWGFLAFA VLVVVLTRHV
ILPFVFALLL AFILAPVVRY LSHRDDGSQR MPRWVAIVLC YLVFLGVLVS SAALVLPRFS
DDASRIGANL PTLYERVNDE WAPALAEWLE SNFPADEGVK PLHEEVVTPG QSVYLPPDTA
FVLTPLDDGR LAVELPPGSL SMLPRPDGGF ELRSGEPPAE SVDLETRIRL WTSQRIENLQ
TSIGDLVSFG QSLMIGLARS VFTFFLVMMV GAFILLDLEK LHGFARSLIP MAYRDDFDLI
AKGINRGLSG VIRGQLIICL VNGVLTYIGL FIFNVEYALV LALVAGIMSV VPIFGSILST
IPVVIVALFS GEGGLDVARA LAAFAWIVGI HLLEANVLDP KIMSSAARIH PVLVIFALIV
GEHYFGLVGA ILAVPVTSMV QVLFMYFRRK AWKLDAEMAR VERRVERRLS RRYRRSSDAG
PR
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