| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2360 |
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| Symbol | |
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| ID | 8544746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3271971 |
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| End bp | 3273113 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646387060 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003266791 |
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| Protein GI | 262195582 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.347608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0362221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCCTGG GCTGGGCCGT CGTGGCCCGG CTCGGGGACA GCGACGATGC CCGCGCCCGC
GCCGGTCGCG CAGGTCCCGC GGCGGTCGAA GTGGCCCCGA TCGAGCACGG CAGCATCGCC
TGGCGACGCA GCTTCAGCGG CACCCTGGAG GCGCGCGCGC AGTTCGTGGT CGCCGCGCAT
GTCAGCGGCC GCGTGGGACG CCTGCTCGTC GATCTCGCGG ACCCGGTCGA GCGCGGCCAG
GTGGTCGCCG AGCTCGACGA CGACGAGCGC GTCGAGGGCG TCAGCCAGGC CGCGGCCGAG
CTGGCGGTGG CCGACGCGCG TTCGGGCGAA GCCCAGGAGG CGCTCACCAT CGCCGAGCGC
GAATTCGATC GCATGCGCGG CATGGGCGAG CGCGGCCTCA TCTCCGAGTC CGAGGTCGAC
AGCGCCCGCG CCGAGTACCT GCAGCAGCAG GCGAGCGTAA CCGTGGCCCA GGCCGAGGTC
AAGCGCGCCA CCGCGGCCCT GCGCCTGGCC CGGGTGCGCT CGGGCTACAC CAGCATCGCG
GCCAACTGGA GCGGCGACGA CGCCCAGCGC GTGGTCGCCC AGCGCCACGT CGACGAGGGC
GACATGGTCG CGGCCAACGC GCCGCTGTTC ACCATCGTGG CGCTGTCGCC GATCACGGCA
GTCGTCCACG TGACCGAAAA AGAATACGCG CACCTGGCGC CCGGGCAGCC GGTGAGCGTG
AGCACCGACG CCTATCCCGG GCGCAGCTTC GCCGGCGAGA TCCGCCGCAT CGCGCCGGTA
TTCCGCGAGA GCTCGCGGCA GGCGCGGGTC GAGCTCGAGC TGCCCAACCA GGACGGCGCG
CTCAAGCCGG GCATGTTCGT GCGCGCCGAC ATCGAGCTCG AGCGGGTCGA GGACACCACC
CTGGTGCCCG AGATCGCCCT GGTCACCCGC GACGGCAAGA CCGGCGTCTT TCTGGTCGAG
CCGAGCGGCA CCGAGGTGAG CTGGCGCGTG GTCGAGACCG GCATCCGCGA CGGCGACCGG
GTCGAGGTGC GCGACGCGCT CAGCGGCCGG GTGGTGACCC TGGGGCAGCA GCTCATCGAT
GACGGGTCGG CGATCGACAT CGTCGCCGAG GAGAAAGAAG CCCAGCCCGG CGAGGACACG
TGA
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| Protein sequence | MGLGWAVVAR LGDSDDARAR AGRAGPAAVE VAPIEHGSIA WRRSFSGTLE ARAQFVVAAH
VSGRVGRLLV DLADPVERGQ VVAELDDDER VEGVSQAAAE LAVADARSGE AQEALTIAER
EFDRMRGMGE RGLISESEVD SARAEYLQQQ ASVTVAQAEV KRATAALRLA RVRSGYTSIA
ANWSGDDAQR VVAQRHVDEG DMVAANAPLF TIVALSPITA VVHVTEKEYA HLAPGQPVSV
STDAYPGRSF AGEIRRIAPV FRESSRQARV ELELPNQDGA LKPGMFVRAD IELERVEDTT
LVPEIALVTR DGKTGVFLVE PSGTEVSWRV VETGIRDGDR VEVRDALSGR VVTLGQQLID
DGSAIDIVAE EKEAQPGEDT
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