Gene Hoch_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2351 
Symbol 
ID8544737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3260036 
End bp3260929 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID646387051 
Productbeta-lactamase domain protein 
Protein accessionYP_003266782 
Protein GI262195573 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.805454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.19339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC ACGCATTCTT CGATGAAGAC ACCTATACGC TCAGCTACGT GGTCTGGGAC 
CCCGAGACCC GCGACGCCGT GATCATCGAC CCGGTGCTCG ACTACGATCC CCTGTCCTCG
CAGACCCGTC TCGAATCGGT CGAGAAGCTG AGCGAGTTCG TGCGCGGCGA GAAGCTGCGC
CTGCACTGGA TCCTCGAGAC CCACGCCCAC GCCGACCACC TCAGCGGCTC GCAGGCGCTC
AAGCGGCGCT TCGAGACGCC CATCGCCATC GGCGAGAAGA TCACGCTGGT GCAGGAGACC
TTCAAGGGCA TTTTCGACCT GCCGGACAGC TTCGCCATCG ACGGCAGCCA GTTCGACAAG
CTCATCGCCG ACGGCGAGCG CTTCTCGGCC GGCACGCTCA CCATCGAGGC CATCGCCACG
CCCGGGCACA CGCCCGCGTG CATGAGCTAC AAGATCGGCG ACGCGGTGTT CACGGGCGAC
GCGCTGTTCA TGGACGACTA CGGCACCGGC CGCACCGACT TCCCGCGCGG CAGCGCCCGC
GACCTGTACC ACTCGGTGCA CGAGCGGCTG TACAAGCTGC CCGACGAGAC CCGGGTCTTC
GTCGGCCACG ACTACCAGCC CGACGGCCGC GAGCTGCGCT ACGAGACCAC CATCGCCGCG
TCCAAGGAGC GCAACCCGCA GCTCAGCGAG GCCACCACCG AGGACGGCTT CATCGCCTTC
CGCCACCAGC GCGACGCCGG TCTCAAGGCG CCGCGGCTCA TCTATCAGAG CGTGCAGGTC
AACGTCAACG CGGGCCTGCT GCCCGCGACC CACGACAACG GCCGGCGCTA CCTGGCGATT
CCGCTCAACA TGCGCGTGCC CACCGACGAC ACCGGCGTAC CCGCCGCGGA CTGA
 
Protein sequence
MNIHAFFDED TYTLSYVVWD PETRDAVIID PVLDYDPLSS QTRLESVEKL SEFVRGEKLR 
LHWILETHAH ADHLSGSQAL KRRFETPIAI GEKITLVQET FKGIFDLPDS FAIDGSQFDK
LIADGERFSA GTLTIEAIAT PGHTPACMSY KIGDAVFTGD ALFMDDYGTG RTDFPRGSAR
DLYHSVHERL YKLPDETRVF VGHDYQPDGR ELRYETTIAA SKERNPQLSE ATTEDGFIAF
RHQRDAGLKA PRLIYQSVQV NVNAGLLPAT HDNGRRYLAI PLNMRVPTDD TGVPAAD