| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2316 |
|---|
| Symbol | |
|---|
| ID | 8544702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3220669 |
|---|
| End bp | 3221910 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 646387021 |
|---|
| Product | Saccharopine dehydrogenase |
|---|
| Protein accession | YP_003266752 |
|---|
| Protein GI | 262195543 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3268] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.385349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCC TCATCTACGG CGCCACCGGC CTCGCCGGAA CGCTCATCGC CCGCGGCTTG
CGCGTGCGCG ATCGCTATTT CACCCAGGCG GACGAAAACC CGACCGCAGC CGCGACCGGC
CCCGGCGTCG GTGTCGGCGT CGGCGTCGGC GAGCCGCTCG ACCTGGTGCT CGCGGGCCGC
GACCGGCGAC GGCTCGAGCG CCTGGCCGAG ACCCTGTCAC AGCGCGGCGC CGGCGAGCTG
AGCGTGCGCA CCGCGCCGGT GCACGACGCC GCGGCCCTGC GCGCGGCCAT GGACGGCGTG
GACCTGGTCG TGAACTGCGC CGGCCCCTTC GAGCGCGTCG GCATGCCGGT AGTCGAGGCC
GCCGTGGACG TGCGCGTGCC GTACCTCGAC ATCGCCGCCG AGCAGCGCTT TCTGCGCTCG
GTCTACGAGC AGTACGAGTC GCTCACGCGG CACCGCGAGA CGCTGATCGT ATCGGGGATG
GGCATGGAGA TCGCGCTCGG CGATCTCGGC CTGCACGTCG CCGCGGCCGC GGCCTCGGGC
GCGCTCGCCT CGGTGGTCCC GCCGGTCACC GACGAGCCCG CGGTCGACGA GCTGGCCGTG
GCCTACGCGC TCGATGATCT ACCGCCGACC GCGGCCGCGC GCGAGAGCGC GGTGAGCAGC
CTGTCGGCGC CCATCTCGGT GTGGATCGGC GACCTCTGGG ACCTCCGACC GCCCATGGCC
GAGCGCCGCG CGGTCAACTT CGGCGCCGGC TTTGGCCAGC GCACCGCGCT CCTGCACCCG
GCCGGCGAGG TCATCACCGC GCCCCGCCAC GTGCGCGCCG GACGCGTGCG CGGCTTCCGC
TCGATGCGCG CCGAGGGGCC GCTGAGCGAT CTCGCCACGC GCGTGGCCAC GGCCCTGAGC
CCGGCCCTGC CCAGCCTGTT CATGGGCGCG CTGGGCGCCC AGGCCCGGGC CCAGATCGCG
CCGCGCGATC GCGGCTCCAA GCGCACCCGC TCGCAGCTCC GCTTCGCGGT CTCGTGCGAG
GCGCGCGTGC GCTTCGAGTA CGCACACCTG GTGGTCTCGG GCGCCGATCC CCACCAGAGC
ACGGCGCGCA TCGCGTGCTT CGCGGCGCGC TCCCTGCTGG CCCGGGCCCG CGCCGCCGCC
CTGCCCACGG GCGTGCGCAC CCCGGCCGAG GTGTTCGCGC CCGGCGCCAC CCTCGAGCAC
CTGGTGCAGC GCTGCGACCT GCGCCTGCGC AAGAGCTTCT GA
|
|---|
| Protein sequence | MSVLIYGATG LAGTLIARGL RVRDRYFTQA DENPTAAATG PGVGVGVGVG EPLDLVLAGR
DRRRLERLAE TLSQRGAGEL SVRTAPVHDA AALRAAMDGV DLVVNCAGPF ERVGMPVVEA
AVDVRVPYLD IAAEQRFLRS VYEQYESLTR HRETLIVSGM GMEIALGDLG LHVAAAAASG
ALASVVPPVT DEPAVDELAV AYALDDLPPT AAARESAVSS LSAPISVWIG DLWDLRPPMA
ERRAVNFGAG FGQRTALLHP AGEVITAPRH VRAGRVRGFR SMRAEGPLSD LATRVATALS
PALPSLFMGA LGAQARAQIA PRDRGSKRTR SQLRFAVSCE ARVRFEYAHL VVSGADPHQS
TARIACFAAR SLLARARAAA LPTGVRTPAE VFAPGATLEH LVQRCDLRLR KSF
|
|---|
| |