| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2310 |
|---|
| Symbol | |
|---|
| ID | 8544696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3211639 |
|---|
| End bp | 3212997 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 646387015 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003266746 |
|---|
| Protein GI | 262195537 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCGC GTCTGCCCAT TCTCGATACC GCACCCGCAT GGGCGCGAAG AGAAACTCCG
GTTCAGCTCC GACTCGACGG TGACCCGGTC CGCGGCTACG CCAATGAGAG CGTCGCCGTC
GGCCTCTACG CCAGCGGCCA CCGCGTGCTC TCGCGCTCCA TCAAGTACCA CCGGCCGCGC
GCCTTCTTCT GCCTCGAGGG CCACTGCGGC GGCTGCCTGA TGCGCATCGA CGGCGTGCCC
AACCAGCGCG CGTGTCAGCA GCCGTGCCGC GAGGGCCTGC GCCTGGAGCC GCAGAACGCC
TACCCCTCCG CCGACCTCGA CGTGCTCGAG GCCGTGGACT GGCTGTTCCC GGGCGGCATG
AACCATCACA CCCTGATGAC CGGCTCGCCG CTGCTCAACG CCGTGGCCAA CAAGATCGTC
CGCAAGCTCA GCGGCCTCGG CGAGGCGCCC ACGGCCCCGC CTGCGCGCCT GCCCCGGGCC
GAGGAGCTGG CGCCCGAGGT GCTCGTGGTC GGCGGCGGCC CCGCGGGACT GACCGCGGCC
ACGGCGGCCG CACGCGGCGG CGCGCGCACC CTGCTGATCG AGGAGCAGCC GGTGCTCGGC
GGCAGCCTGC TCGCCGACCC GCGCTTCGGC CCGGTCGCGG CCCATGAGCG GGTCGAAGCC
GCGCGCGCCG CCGGGGTCGA GCTGCGGGCG AGCACCGCGG CCCTGGCCTA CTACGCCGAA
GATCCCCAGC CGGTGCTGGT CGCGGCCTCG CCCGATAGCG CCCTGCGCCT GCGCCCGCAG
CAGACCGTGT GGGCCACCGG CGCCTACGCG GTCAACGCGC CCTTCGTCAA CAACGACCGC
CCGGGCGTAT TCGCCGCGCG CGCGGTCGGC CGCCTGCTGG TGCAGTACCG GGTCAAGCCC
GGCCATCGAG TGTGCATCGC CGATACCGGC GCCGACGCCT ACGCCGCCCT GCTCGGCCGC
GCGCTCGAGG ACGCCGGCTG CGAGGTCGTG CGCGTCGGCG GCGCCGATGC CGACAGCGAG
CGCGGCGAGC GCCTGGTGCG CGTGCTCGGC GCGCGCGGCC ACGCCTGGGT CGAGGGCGCC
GAGGTCGAGG ACGCGCGCGG CCGCAGCCGG CGCATCGAGT GCGACATCAT CGCGGTCGCG
GCCACGCCCG CGCCGGCCTC CGAGGGCCCG CGCCAGCACG GCTGCCAGGT CGCCTACGCC
AGCGCGGCCG GCGGCTTTGC CGTCCAGGCG GACGAATTCG GACGCGCCGG CCCCAGCGGC
GTGTGGGCGT GCGGCGACGT GTGCGGCTAC CAGGGCCCCG AGCGCGCAGC CGAGCGCGGC
GCCGAGGTCG GCGCAGCGGC CGCGGAGGCG GTGCCGTGA
|
|---|
| Protein sequence | MNARLPILDT APAWARRETP VQLRLDGDPV RGYANESVAV GLYASGHRVL SRSIKYHRPR
AFFCLEGHCG GCLMRIDGVP NQRACQQPCR EGLRLEPQNA YPSADLDVLE AVDWLFPGGM
NHHTLMTGSP LLNAVANKIV RKLSGLGEAP TAPPARLPRA EELAPEVLVV GGGPAGLTAA
TAAARGGART LLIEEQPVLG GSLLADPRFG PVAAHERVEA ARAAGVELRA STAALAYYAE
DPQPVLVAAS PDSALRLRPQ QTVWATGAYA VNAPFVNNDR PGVFAARAVG RLLVQYRVKP
GHRVCIADTG ADAYAALLGR ALEDAGCEVV RVGGADADSE RGERLVRVLG ARGHAWVEGA
EVEDARGRSR RIECDIIAVA ATPAPASEGP RQHGCQVAYA SAAGGFAVQA DEFGRAGPSG
VWACGDVCGY QGPERAAERG AEVGAAAAEA VP
|
|---|
| |