| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2307 |
|---|
| Symbol | |
|---|
| ID | 8544693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3209448 |
|---|
| End bp | 3210053 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646387012 |
|---|
| Product | phosphotransferase KptA/Tpt1 |
|---|
| Protein accession | YP_003266743 |
|---|
| Protein GI | 262195534 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1859] RNA:NAD 2'-phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.545628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACG CGCAGAAGCA TCTCAGTCGC CGGATATCGT CGCTGCTGCG CCACCGCGCC
GGGGACGCCG GACTTTCCAT GGACGCCGCC GGCTGGGTCG AGATAGATGC TCTGCTCGCG
CACCTGGGCG AGTCGCGTGA GCTGCTCGAT GCGGTGGTGC AGACGAATAA CAAGGCCCGC
TTCGAAGTCG CCGGCACGCG TATCCGCGCG TCTCAGGGAC ACTCGCTCGA GAACATGCCG
GTCACGCGGG ACGCCCTCGA GGCGAGCTGG TCGCGCTTCG ATGGTGAAGA CTCGCTATGG
CATGGCACGC AGCCGGAGGT AGTTGAGAGT ATTGCGCGCG ATGGGCTGCT GCATGGCGCT
CGCAGCCACG TGCATCTCGC CGAGAGCCGC GACAGCTCGG TCGGCAAACG CAGCAATGTG
GGCGTTCTGC TCGAAATTTC GCCGAGCGAG CTGCGCGCAG CCGGCTGGGA GCTATTCAAG
AGCCCCAACG GCGTGATTCT CTGTCGTCAC GTGCCGCCCG AGTGCATCGT GGACATCCAT
CCCCTCACCA AGCGAGCACG ACAGAACGCC AGCGCCATGC GAGCAGCTCT GAGCCTACCC
GCCTGA
|
|---|
| Protein sequence | MQDAQKHLSR RISSLLRHRA GDAGLSMDAA GWVEIDALLA HLGESRELLD AVVQTNNKAR
FEVAGTRIRA SQGHSLENMP VTRDALEASW SRFDGEDSLW HGTQPEVVES IARDGLLHGA
RSHVHLAESR DSSVGKRSNV GVLLEISPSE LRAAGWELFK SPNGVILCRH VPPECIVDIH
PLTKRARQNA SAMRAALSLP A
|
|---|
| |