| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2296 |
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| Symbol | |
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| ID | 8544682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3197519 |
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| End bp | 3198460 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646387001 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003266732 |
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| Protein GI | 262195523 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.3963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCT TGCCGCTCAT CGAGATCGTG CTGGCCACGG CTGTGGCCAG CGGCACGCCG
ATTCTGCTGG CCGGGCTGGG CGAGCTGGTG GCCGAGAAGA GCGGCGTGCT CGACCTCGGC
ATCGAGGGGC TGATGGCGAC CGGCGCGTGC GCGGGCTTTG CCGCCGCACA CCTGAGCGGC
AACCCCTGGC TCGGCGTCGG CGTGGCCGCG ATCGCGGGCG CCGCGCTGGC GCTGGTGCAC
GCGCTGGCCG CGGTGCTGCT GCGCGTGGAC CAGGTCGTGA GCGGCCTGGC GCTGGTGTTC
GTGGGCACGG GGCTGGCGTC GCTGTTTGGC CGCGGCCTGG TCGGTCAGGT CGCGCCGACG
CTGACGCCAG CGCCGCTGCC GCTGCTCGGT GAGCTGCCCG TGCTCGGGCC CGCGCTGTTT
TCGCATACGC CGCTGGTGTA TCTGAGTATC GCGCTGGTGC CATTGTGCTG GTGGCTGTTG
CAGCGCACGC GGCCGGGGCT GGCGCTGCGG GTGTGCGGCG AGCAGCCGCG CCTGGCCGAT
GCCAGCGGCG TGCGGGTGGC TGGCGTGCGC GTCGCCGCGA CGTGTATCGG CGGCGCGCTG
GCCGGGCTCG GCGGCGCGCA GCTCTCGCTG GCGGAGACGC CGAGCTGGGT CGATGGGCTG
GTCGCCGGTC GCGGGTGGAT CGCGCTGGCC ATGGTGCTGT TCGCGCTGTG GTCGCCGTGG
CGTCTGCTGA TCGGCGCGTG GCTGTTTGGC GGGCTGGTGG CGTTGCAGTT CCGGGCGCAG
GCGTTTGGGC TCGAGCTCAA TCCGTATCTG CTGACGATGC TGCCGTATCT GGCGACGATC
GCGGTGCTGG CTGCGACGGT GCGCGCGCGC CGACGAGGTG CGCGTACGCG CGGCGCACCG
GCGGCCCTGG GGCTGCCGTA CGCGCGCGAG CGCCGCGACT GA
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| Protein sequence | MDTLPLIEIV LATAVASGTP ILLAGLGELV AEKSGVLDLG IEGLMATGAC AGFAAAHLSG
NPWLGVGVAA IAGAALALVH ALAAVLLRVD QVVSGLALVF VGTGLASLFG RGLVGQVAPT
LTPAPLPLLG ELPVLGPALF SHTPLVYLSI ALVPLCWWLL QRTRPGLALR VCGEQPRLAD
ASGVRVAGVR VAATCIGGAL AGLGGAQLSL AETPSWVDGL VAGRGWIALA MVLFALWSPW
RLLIGAWLFG GLVALQFRAQ AFGLELNPYL LTMLPYLATI AVLAATVRAR RRGARTRGAP
AALGLPYARE RRD
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