Gene Hoch_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2283 
Symbol 
ID8544669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3178487 
End bp3179770 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content73% 
IMG OID646386988 
ProductPolyamine oxidase 
Protein accessionYP_003266719 
Protein GI262195510 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.844558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGG ACATGTGGGA CGTAATCATC GTCGGCGCCG GCATCGCCGG TCTGGGCGCG 
GCTCGCCGCT TGGTCGACGC CGGCCTGCGG GTGCTCGTGC TCGAGGCCCG CGCGCGCATC
GGCGGCCGCA TCCACAGCGA TCGCTCGCTG GGCGTGGCGG TCGATCTCGG CGCGTCGTGG
ATTCACGGTG TCACCGGCAA CCCCATCACG GCCCTGGCCC GCGCCCACGG CGTGCGCGCC
GCGCTGGCGC AGCACGCGGC GTTCGATCTC TGGGATGCCG CTGGCTGCCG CCTGGCTCTG
GACGAGCGTC TGAATTCGTT TCGCGACTTC CAAGAAGTGC TGGCGCAGGC CACGGAGCAG
GCCTCGCGGC AGGACTCGCT GGCGCAAGCG CTCGCGCGCG TGGCTCCGGC GATGGACGCG
CGTGAGCAGC GGCTCTTCGA GGGCTGGAAA ACCTGGCTCG CGCTGGTGAT GGGCGCCGAT
GTCGCCGCGC TCTCGGGCCG GCACTGGAGC GATGACGAGG AGCTGCCCGG CCCCGACTAC
GTGATCCCGG GCGGCTGCGA TCAGCTCCTG CCGGCGCTGG CCGACGGCGT CGATGTCCGC
CTCGAGCACG CGGTGCGCGG CGTGCGCTGG AGCGACGATC CGTCCCAGGG CGTCGAGATC
GACAGCGAGC GGGGCAGCTT TCGCGCCGCG CGCGCGATCA TCACCCTGCC CCTGGGCGTG
CTCGCGAGCG GCGCCGTACA CTTCGAGCCC GCCCTGCCGC CGGCCAAGCA GCGCGCCATC
GCCGGCCTGG GGATGGGCAC GCTCGACAAG ATCGCGATGC GCTTCCCAGC GCCTTTCTGG
CCCGAACATC TCTCCACGCT GCAGATGCTC GCGCGCGTGC CGGATGAGCC GGTGGGTTTC
CTCAGCCTGC TGCCCCACGG CGCCCCGGTG CTGGTCGGGT TTCAGGCCGG CGCGGCCGCG
GTCACGCAGG AGCGGCAATC CGACGACGAG ATCATCGCCC GCGCGCTCGG GGTGCTGCGG
CGCAGCTTTG GCGGCGCGGT CGCCGAACCC GAGAGCGCGC TGGTCACCCG CTGGCACGAG
GATCCGTGGA GCCGCGGCTC GTACTCGCAT GTGCCGCCCG GCGCCAGCAG CGTGCTCTAC
AAGCGCATGG CCACGCCGCT GGGACAGGCC CTGCTGTTTG CCGGCGAGGC CACCTCGCGC
GCCTACCCGG CGACGATGCA CGGCGCGTAT CTGTCCGGCC TGCGCGAGGC CGAGCGGGTG
CTGGCAGCCG AAACGCACGA ATGA
 
Protein sequence
MEEDMWDVII VGAGIAGLGA ARRLVDAGLR VLVLEARARI GGRIHSDRSL GVAVDLGASW 
IHGVTGNPIT ALARAHGVRA ALAQHAAFDL WDAAGCRLAL DERLNSFRDF QEVLAQATEQ
ASRQDSLAQA LARVAPAMDA REQRLFEGWK TWLALVMGAD VAALSGRHWS DDEELPGPDY
VIPGGCDQLL PALADGVDVR LEHAVRGVRW SDDPSQGVEI DSERGSFRAA RAIITLPLGV
LASGAVHFEP ALPPAKQRAI AGLGMGTLDK IAMRFPAPFW PEHLSTLQML ARVPDEPVGF
LSLLPHGAPV LVGFQAGAAA VTQERQSDDE IIARALGVLR RSFGGAVAEP ESALVTRWHE
DPWSRGSYSH VPPGASSVLY KRMATPLGQA LLFAGEATSR AYPATMHGAY LSGLREAERV
LAAETHE