Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2279 |
Symbol | |
ID | 8544665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3174819 |
End bp | 3176261 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646386984 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_003266715 |
Protein GI | 262195506 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.609386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA CCACCAAACT CATCGCGGTC GCGACCATCG CCCTCGCCGC CGCTCATCTG CTCTCCGGGG CGCTCTGCAC CTCTTCTTCG GAACGCCTGA GCGCGGCCGA GCGGGCGGCG ATGGCCGACG CCGCCGCGAC GCTCGCACGC GCCGTCGACG TGGTCTGGGA AGAGGGCGGC GCCGCCGCCG CGCTCGAGAT GGTCGAGAGA CTCGACGACC CCGAAGGCGG CTACGACCTG GCTCTGTACG ATGCGGATGC GCGCGCGACC ATGTCGGTCG AGGCCTTTGC GGCGCTGGCC GAGGCCGAGG CCGAGGCCGC TATCCTCGAG CCGGAAGGCG AGCAGGGCGC GCTGGCGCTG CGCCTCGGTG TCGGACCCGG CGACTCGGTG CGCAAGGTCC TGGCCGTGCG CCGCGCGACG CTCAGCCCGG GCGGCTGGAT GAGCGGTGAC GCCGGCCGTT TCGGGCTCTT GCTGGCGCTT TGCAACCTGG CCCTGCTGGG CGCTGGGCTG CGCTGGATCG ACGGTCCGCT GCGCAGCCTG GGCGCGCAGC TCAGCGCCAG CGCTCGCGAC GGTGGGCGAG CGCGCATCAG CGTCCGCGGC GGCGACGAGA TCGGCCGACT GGCCGAACGA GCCAATGAGT TCCTCGACGG ACTGCGCCAG TCGTGGACCG ATATGCGCGG CGAGTGGCAG ATGCGCACCT TGCTGTTCGA GCGGCTGCGC CGCGCCGATC GCCTGAGCAC CATGGCCCGC CTGGCCTCGG TGATCGCCCA CGACCTGGGC ACGCCGCTCA ACGTGGTTTC GGGCCGCGCC ATGATGATCT CGTCCACCCC GGACTGCGCC CCCGAGATCG TCTCGGACGC GCGCATCATC GGCGAGCAGG CCAACAACAT GACCCGCCTG ATCCGCAAGA CCCTCGACTA CGCGCGGCGC GGTGAGCTGC ACCCGGCCGA TGAGGACATG GGCGAGCTGA TCGAGAGCGC GATCTCGCTG GTGACGCCGA TCGCCGAGCA CAGCCAGGTG AGCATCGAAT TCCTGGAAGC GCCCGCGATC ATGGCCAAGG TGGACGAGCA GAAGGTTCTG CAGATTTTGA CAAATGTGAT GATCAACGGC GTCCAGGCGC TCCCCGAAGG CGGTCGCATG CGCGTGCGCC TCGACCGCGA GCTGGTGGAG GAGCCACCCG ACGCGCGGGC AGCCGCCGGC CAGTACGTCC GTATCACCAT CGAGGACGAG GGCGTGGGCA TGGCGCCCGA ATTGCGCGAA AACGTATTCG AACCGTTTTT TCAAGCATCT GGCGGGACTC CTAGCAGTGG CCTTGGACTG GCCGTCTGCT ATGCCGTAGT TCGCGAGCAC GGTGGATGGA TAACCGTCCA CAGTGAGCTT GGCGAAGGCA GCCGATTTGA TGTCTACTTG CCGAACAGCA ATGACGAGGG AGAAGATGCA TGA
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Protein sequence | MKITTKLIAV ATIALAAAHL LSGALCTSSS ERLSAAERAA MADAAATLAR AVDVVWEEGG AAAALEMVER LDDPEGGYDL ALYDADARAT MSVEAFAALA EAEAEAAILE PEGEQGALAL RLGVGPGDSV RKVLAVRRAT LSPGGWMSGD AGRFGLLLAL CNLALLGAGL RWIDGPLRSL GAQLSASARD GGRARISVRG GDEIGRLAER ANEFLDGLRQ SWTDMRGEWQ MRTLLFERLR RADRLSTMAR LASVIAHDLG TPLNVVSGRA MMISSTPDCA PEIVSDARII GEQANNMTRL IRKTLDYARR GELHPADEDM GELIESAISL VTPIAEHSQV SIEFLEAPAI MAKVDEQKVL QILTNVMING VQALPEGGRM RVRLDRELVE EPPDARAAAG QYVRITIEDE GVGMAPELRE NVFEPFFQAS GGTPSSGLGL AVCYAVVREH GGWITVHSEL GEGSRFDVYL PNSNDEGEDA
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