| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2269 |
|---|
| Symbol | |
|---|
| ID | 8544655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3156773 |
|---|
| End bp | 3158158 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646386974 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_003266705 |
|---|
| Protein GI | 262195496 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.778693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0483153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCAA GGAATCTGTT TCGACTGATG GCGGTCGGCA TATTGGGCGG GTCGTTCGCG
ACCGGCTGTG CCGCCGTCGA AGAGGACTTC GCGGAGTCGG TGGCGACGAC CACGGCGCCG
CTGCTGGGCG ACGCGTCGAC GGCGATCGAG GGCGAGTACA TCGTCAAGTT CAAGGACGAT
GTAGCCGCCA AGGGCGTGGG CATCGCGATG AACCGGGTGA GCCTCGCCAG CGCGAACAGC
CGCATCATGC GCGAGTACAA GACCTTCCCG GGCTTCGCCG CCAAGCTGGA CAAGCGCGAT
CTGCAGAATC TGCAGAAGAA CCCCGACGTC GAGTACCTCG AGTTCAACGG CCGCATGGAG
GCGCTGAAGA TCGAGAATGT GCAGGCCGAC GGCATCGACC GCATCGACCA GCGCAGCGGC
CGCAACGGGC AGTACAACGA CAGCGATCTG ACGGCCAGCG GTGTGACCGC GTACATCGTG
GACACGGGCA TCCGCTCGAC GCACAACGAG TTCACGGGCC GCGTGGCCGG CACCATCGAC
TTCGTGGGCG ACGGTCAGAC CGAGGACTGC AACGGTCACG GCTCGCACGT GGCCTCGACC
GTGGCCGGCA CCCAGTTCGG CGTGGCCGAC GGCGCGCAGA TCTACGGCGT GCGCGTGCTC
AACTGCTCGG GTTCGGGCTC GTTCGCGGGC GTGATCAGCG GCATCGACTT CGTGGCCCAG
GACTGCTCGG GCGACTGCGT GGCCAACATG AGCCTCGGCG GCGGTTTCTC GCAGGCGGTC
AACGACGCGG TGGAGGCCGC GGTGGCGGCC GGCATCCCGT TCGCGGTGGC CTCGGGTAAC
TCCAACGCCG ACTCGTGCGG CTTCTCGCCG GCGAGCGCGC CCTCGGCGAT CACGGTGGAC
GCGGCGGCCG ACAACGACAG CCGCGCGTCG TTCTCGAACT TCGGTAGCTG CTCGGACCTC
TACGCCCCGG GCGTGTCGAT CCTGGGCGCC GACATCGGCA GCGACAGCGA CACGCAGTCG
ATCTCGGGCA CCTCGATGGC GAGCCCGCAC GTGGCCGGCG TGATGGCCCA GATCCTCGAC
TGCAACCCCG GCGCGACGCC GGCCGAGGTC GAGGCGATCC TGAAGGCGGC GGCGACCTCG
GGCGCGATCA GCAACCCGAA CGGCACCGCC AACCTGCTGC TCTTCACCGG CGCCGAGCTG
TGCGACGAGT TGCCCGACCC GGATCCCGAC CCGGATCCGG ATCCGGAGCC CGATCCCGAC
CCGGAGCCCG ACCCGGCGAG CTGCGAGGGC CGCTGCGGCA GCTTCGATAG CGGCGCCGTC
TGCCAGTGCG ACCGCTTCTG CCAGTTCTTC GGCGACTGCT GCTCGGACTA CTTCAACGAG
TGCTGA
|
|---|
| Protein sequence | MQARNLFRLM AVGILGGSFA TGCAAVEEDF AESVATTTAP LLGDASTAIE GEYIVKFKDD
VAAKGVGIAM NRVSLASANS RIMREYKTFP GFAAKLDKRD LQNLQKNPDV EYLEFNGRME
ALKIENVQAD GIDRIDQRSG RNGQYNDSDL TASGVTAYIV DTGIRSTHNE FTGRVAGTID
FVGDGQTEDC NGHGSHVAST VAGTQFGVAD GAQIYGVRVL NCSGSGSFAG VISGIDFVAQ
DCSGDCVANM SLGGGFSQAV NDAVEAAVAA GIPFAVASGN SNADSCGFSP ASAPSAITVD
AAADNDSRAS FSNFGSCSDL YAPGVSILGA DIGSDSDTQS ISGTSMASPH VAGVMAQILD
CNPGATPAEV EAILKAAATS GAISNPNGTA NLLLFTGAEL CDELPDPDPD PDPDPEPDPD
PEPDPASCEG RCGSFDSGAV CQCDRFCQFF GDCCSDYFNE C
|
|---|
| |