Gene Hoch_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2264 
Symbol 
ID8544650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3146946 
End bp3147758 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID646386969 
Productglycosyl transferase family 2 
Protein accessionYP_003266700 
Protein GI262195491 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.503819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.135779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC CCATCGTCTC GGTCGTCAGC CTCACGTGGA ACAGCGCCAA ATTCGTCGAG 
CCGCTTCTCA GCACGCTCGA GCGCGACATC GAAGTATCCG ATGTCCCCAC GGAAATCATC
ATCGTCGACA ACGGCTCCAG CGACCGCACG CTGGAGCTGA TCGCGGAGTT CCAGGAACGC
CACGACAACA TCCACGTGGT GCCGCTGTCG ACCAACCACG GCACCACGGT GTCGCGCAAC
ATCGGCATTC GCATGGCGCG CGGCAAGTAC GTGTTCATCC TCGACAGCGA CACCGAGATC
CCCGAGGGCA CGCTGCGCGG CCTGGTCGAC GGCGCCGAGA GCCTGCCCGA GCGCGAGAGC
CTGGGCCTGT TGCACCCGCG CCTCATCTAT CCCGACGGCG AGTTCCAGGA GTCGGCGCGC
CGCTTCCCGA CCTTCTTCAC CAAGGTCTAC CGGCTGCTGC GCATGGAGGA GCGGCGCGCG
CGCGACGAGA GCATCGACGC GGTGCTGGCC AAGCAGATGG TGCCCGTGGA CTACGCCATC
TCGGCCGCGT GGCTGGTGCC GCGCGAGACC TTCGACCGCA TCGGCCTGCT CGACGAGGAG
ATTTTCTACT CGCCCGAGGA CGTCGAGTTC TGCGCGCGCT GTTGGAAGCA CGGCCTCAAG
GTCTGGTACT ACCCGGAGGT CGAGATCATC CACAACTGCC AGCGCATCAC CTCGAAGAAG
CCCATCTCCA AGATGGGCCT GAGCCATATG AAGGGCCTGT TCCGCTACTG GTGGCAGTAC
GGCTCCTTCC TCAACCGCCC GCGCCAGTCC TGA
 
Protein sequence
MSKPIVSVVS LTWNSAKFVE PLLSTLERDI EVSDVPTEII IVDNGSSDRT LELIAEFQER 
HDNIHVVPLS TNHGTTVSRN IGIRMARGKY VFILDSDTEI PEGTLRGLVD GAESLPERES
LGLLHPRLIY PDGEFQESAR RFPTFFTKVY RLLRMEERRA RDESIDAVLA KQMVPVDYAI
SAAWLVPRET FDRIGLLDEE IFYSPEDVEF CARCWKHGLK VWYYPEVEII HNCQRITSKK
PISKMGLSHM KGLFRYWWQY GSFLNRPRQS