| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2260 |
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| Symbol | |
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| ID | 8544646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3142761 |
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| End bp | 3143948 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386965 |
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| Product | integrase family protein |
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| Protein accession | YP_003266696 |
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| Protein GI | 262195487 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.46728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0539974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGA ACCGAGACGC CGATACGAAC TGCGACTGGC AGCGCTGGCT GGCGCGCTTC
GATGACTACC TGCGCACCGA ACGCGGCGGC TCCGCGCACA CGCGCGCCGC CTACGGCCGC
GACCTGGCCG AATTCGGCCG GGTGTACGAA GAACGCAGCG GCGCGCCGCC GGTGCCGGCA
CAGGTGGCCG TGCTCGACAT CCGCGCCCAC CTGGCCGGGC TATACGAGCG CAACGACGCC
GCCACCATGG CGCGCAAGCT GTCGGCGCTG CGCTCGTTCT TCGCCTTTTT GGTCCAGCGC
GGCGCGCTCG ACAACAACCC GGCCCGCGGC GTGCGCAGCC CCAAGCGGCG CAAGGCGCTG
CCGCGCGCGC TCGACGTGGA CGACGCCTTT CGCCTGATCG AAGCCCCGAC CCGCGCGCCC
GCATCCGGCG CCGACGCGGC CGCCGCGTCC CCGGCCCGAA ACGTTGGCCG AAGCGGCGGC
CGGAGCGCCA ACCGCGCCGG CGCTACCGGC ACCGCGAGCG CCGGCAAGAA CAAGCGGGCC
AAGACCAGCC GCGAGCCGCT CAAGCTGCGC GATCGCGCCA TCGCCGAGGT GCTCTATGGC
AGCGGCCTGC GCGTCGGCGA GTGCTGCGCG CTCGACCTCG ACGACATCGA CCGCGCGCGC
CTGTCCTCGG CCCTGGTGCG CGTGCGCCGC GGCAAAGGCG GCAAAGAGCG CATCGTGCCG
CTCGGCCGCC AGGCGGTGGC CGCGCTCGAC GCCTACCTGA ACGTGCGCCC GCTGCTGCGC
GATCCCAAGA CCGGCGCCCG CGATCCCGCG GCCCTGTTCC TCAGCTACCG CGGCACCCGC
TTAACCACCC GCTCGGTGCA GCGCATGATC GGACGCAACG CCCAAGAAGT CGGCGCCTAC
GAGGCCACAC CGCACGCGCT GCGCCACTCC TTCGCCACCC ACTTGCTCGA CAGCGGCGTC
GATCTCCGCG CCATCCAGGA GCTTCTGGGC CACGCCAGCT TGGCCTCGAC ACAAATCTAC
ACCAAAGTGT CTCTCGACCA TTTGATGAAC GTCTACGACG CTAGCCATCC GCGCGCCCGC
GCGTCCTCGC CCGGCACCGC CGCGGCCCCC GCCGCCGCCG ATGGACCCCC GGCCGACGCC
GCGTCCGGGT CCGCGTCCGG TCCGCGAAAG AGTCCCCCTG ATACTTGA
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| Protein sequence | MDMNRDADTN CDWQRWLARF DDYLRTERGG SAHTRAAYGR DLAEFGRVYE ERSGAPPVPA
QVAVLDIRAH LAGLYERNDA ATMARKLSAL RSFFAFLVQR GALDNNPARG VRSPKRRKAL
PRALDVDDAF RLIEAPTRAP ASGADAAAAS PARNVGRSGG RSANRAGATG TASAGKNKRA
KTSREPLKLR DRAIAEVLYG SGLRVGECCA LDLDDIDRAR LSSALVRVRR GKGGKERIVP
LGRQAVAALD AYLNVRPLLR DPKTGARDPA ALFLSYRGTR LTTRSVQRMI GRNAQEVGAY
EATPHALRHS FATHLLDSGV DLRAIQELLG HASLASTQIY TKVSLDHLMN VYDASHPRAR
ASSPGTAAAP AAADGPPADA ASGSASGPRK SPPDT
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