| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2258 |
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| Symbol | |
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| ID | 8544644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3140760 |
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| End bp | 3142130 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646386963 |
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| Product | heat shock protein HslVU, ATPase subunit HslU |
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| Protein accession | YP_003266694 |
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| Protein GI | 262195485 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0503623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG CCCTGGAGCT GACCCCGGCC GCCATCGTCG CCGAGCTCGA CCGCTACATC
GTCGGCCAGA AAGCGGCCAA ACGCGCCGTC GCCGTGGCCC TGCGCAACCG CTGGCGCAGG
CAGCAAGTCG AGGGCGAGCT CAAGGACGAG ATCGCGCCCA AGAACATCAT CATGATCGGC
CCCACCGGCG TCGGAAAAAC CGAGATCGCC CGGCGCCTGG CCAAGCTGGC GCGCGCGCCC
TTCGTCAAGG TCGAGGCCTC GAAGTTCACC GAGGTCGGCT ATGTCGGACG CGACGTCGAC
TCCATCGTGC GCGACCTCAT GGAGGTGTCG ATCAAGCTGG TGCGCGACGA GGAGTCGGTC
AAAGTGCGGC CCAAAGCGCG CGAGGCCGCC GAGGAGCGGC TGCTCGACCT GCTGCTGCCG
CCGCGGCCGC GCGCGTTCTC CGACCGACCT CCGGGCCCGG ACGGCCAGAG CGGGCCGCAA
CCGGCCGACA CCGCCACGCG CGAGAAGCTG CGCACGCTGC TGCGCGACGG CAAGCTCGAG
GAGCGCGAGG TCGATGTCGA GATCACCGAG GACAACAGCC CCTTTCTACA GATCTTCGGC
GGCGCCGGGG TCGAGGAGAT GGGCCTCTCG GGGCTGCGCG ACATGCTGGG CTCGATCGGC
AAGAAGACCA AGTCGCGCAA GATGAAGATC CCGCAGGCGC TCGAGGCGCT CACCGACCAG
GAGGTCGACA AACTCATCGA CGCCGAGACG CTCACGCGCG AGGCCGTGAC CCGGGCCGAG
AACGCCGGCA TCGTGTTTCT CGACGAGGTG GACAAAATCG CCGTGGGCCA GGACGCGCGC
CAGGGTCCCG ACGTCTCGCG CGAGGGCGTG CAGCGCGATC TTTTGCCCAT CGTCGAGGGC
TCGACCGTGA CCACCAAGTA CGGCGTGGTG CGCACCGATC ACGTGCTGTT CATCGCCGCC
GGCGCGTTCC ACACCAGCAA GCCCTCGGAC CTCATCCCCG AGCTGCAGGG CCGCTTCCCC
ATCCGCGTCG AGCTCGAGCC GCTCACCGAC GCCGACTTCG TCCGCATCCT CACCGAGCCG
CGCAACGCGC TGACCAAGCA GTACGTGGCC CTGCTCAGCA CCGAGGGCAT CGACATCCAG
TTCGAGGATG AGGCCGTGCG CGAGCTGGCG CACATCGCGG CCGAGGTCAA CAGCCGCACC
CACAACATCG GCGCCCGCCG GCTGCACACC GTGCTCGAGC GCCTGCTCGA GGAGCTGCTG
TTCTCGGCGC CCGACATCGG CCCCCAGACC ATCACCATCA CCAAGCCCTA CGTGGCCGAG
CGCCTCGACG CGCTGGTCCA GGACGAGGAC CTGGCCAACT ACATCCTGTG A
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| Protein sequence | MKTALELTPA AIVAELDRYI VGQKAAKRAV AVALRNRWRR QQVEGELKDE IAPKNIIMIG
PTGVGKTEIA RRLAKLARAP FVKVEASKFT EVGYVGRDVD SIVRDLMEVS IKLVRDEESV
KVRPKAREAA EERLLDLLLP PRPRAFSDRP PGPDGQSGPQ PADTATREKL RTLLRDGKLE
EREVDVEITE DNSPFLQIFG GAGVEEMGLS GLRDMLGSIG KKTKSRKMKI PQALEALTDQ
EVDKLIDAET LTREAVTRAE NAGIVFLDEV DKIAVGQDAR QGPDVSREGV QRDLLPIVEG
STVTTKYGVV RTDHVLFIAA GAFHTSKPSD LIPELQGRFP IRVELEPLTD ADFVRILTEP
RNALTKQYVA LLSTEGIDIQ FEDEAVRELA HIAAEVNSRT HNIGARRLHT VLERLLEELL
FSAPDIGPQT ITITKPYVAE RLDALVQDED LANYIL
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