| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2256 |
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| Symbol | |
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| ID | 8544642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3137574 |
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| End bp | 3138956 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386961 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_003266692 |
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| Protein GI | 262195483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.157729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC ACGACAAAAC AAAGGCAAGG ACGCGTCTCG CACCCCTGGC CGAACCCGGA
CGGTTGCGCT CGCTGGCGCT GGAAGCGTGG CAACGCACGC GTATCGATTG GCGATTTGCG
CGCGACGGTC TGCATGGCCT GCTGCGTCAG CAAGGGGTCG GCGCTGCCGA ACGAGGCGCC
GTCAGCGAGC TGATCTTCGG CATGATTCGC AACGTGCGCC GCATCGACGC GGCGCTCGAG
GCCGGTGGCG TCACCGCGCA ATCGGCTGGA CGTGTGCTCG ACGCAGAGCG TCTTCTCGCG
TATCTGGTGC TCGCGGAGGT GATTTCGCCC GAGCGCGCGG CGGCGCAGAC GCGTCCCCAG
GTAGGCGCGA TCGACTGGCA GGCGGTGGCC GCGATCGATC AGCGCATCGC GGCCGAGAGC
TCGGTCGCGC GCCGCATCGC GTTGCACGAC TCACTGCCCG ACTGGTTGGC CGAGGCATTG
GTCCGCGGTC TGGGCGAACG CGCCGAGGAG ATCGCTGGCT CGCTTTCTGG ACGCGCGTCC
ATGACGCTGC GCGCAAACAC GCTGGTGGGC GATCGCGAGC AGCTCCGGGC GGCGCTGGCC
GAAGACGGCG TCGAGGTCGA ACCCACGCGC TTCGCGCGCG ATGGACTGGT CGCCAGCGGA
CGCAGCAATC TGTTCGCGCT GAGCTCGTAC AAGCGGGGCG GGTTCGAGGT GCAGGACGAG
GGCAGTCAGC TCATCGCCGC GCTGTGCGCG CCGCCGCTGC GCTCGCTGGT GGTCGATTAC
TGCGCGGGCG CGGGCGGCAA GACCCTGGCG CTGGCGGCCG CGCTCGAGAA TCGCGGGCGC
GTGGTCGCCA GCGACACCGA CGCGCGCAAG CTGCAGGAGC TGCGCCGGCG GGTCAAGCGC
GCGCACGCGA GCAACGTCCA GGTGCTCACC CTGCCGCCCG ATGGCACCTG GCCGGCGGCG
CTGGCCGCGC TGCAGGGCAC GGTGCAGCGC GTGCTGGTCG ATGCGCCGTG TTCGGCCGTG
GGTACCATGC GCCGGCATCC CGAGCTGCGC TGGCGACTGA GCGCGGACGA GGCCGCCCGC
TATCCCGCGC TGCAGTTCGC GCTGTGCGAG CGCTCGCTGG CGCTGCTGGC GCCCGGCGGC
GAGCTCATCT ACGCCACCTG CACGCTGCTG CGCGACGAGA ATCAGGGCGT GATCGAGCGC
CTGCTGGCGG TGCATCCCAA CCTGTCGCTG GTGCCCGCGA GCGAGCGCGT CAGTGAGATC
TGGGGCGCCG CGGCCGCGGC CGCGCTGTGC GTGGACGAGG GCCGCTATCT GCGCGTGGAC
CCGGCCGCGC ACGGCACCGA CGGCTTCTTT GCCGCGGTAC TTCGGCTGTC GCAGCCGGAC
TGA
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| Protein sequence | MMNHDKTKAR TRLAPLAEPG RLRSLALEAW QRTRIDWRFA RDGLHGLLRQ QGVGAAERGA
VSELIFGMIR NVRRIDAALE AGGVTAQSAG RVLDAERLLA YLVLAEVISP ERAAAQTRPQ
VGAIDWQAVA AIDQRIAAES SVARRIALHD SLPDWLAEAL VRGLGERAEE IAGSLSGRAS
MTLRANTLVG DREQLRAALA EDGVEVEPTR FARDGLVASG RSNLFALSSY KRGGFEVQDE
GSQLIAALCA PPLRSLVVDY CAGAGGKTLA LAAALENRGR VVASDTDARK LQELRRRVKR
AHASNVQVLT LPPDGTWPAA LAALQGTVQR VLVDAPCSAV GTMRRHPELR WRLSADEAAR
YPALQFALCE RSLALLAPGG ELIYATCTLL RDENQGVIER LLAVHPNLSL VPASERVSEI
WGAAAAAALC VDEGRYLRVD PAAHGTDGFF AAVLRLSQPD
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