| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2235 |
|---|
| Symbol | |
|---|
| ID | 8544621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3109118 |
|---|
| End bp | 3110122 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646386940 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003266671 |
|---|
| Protein GI | 262195462 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0461241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAG CGGCGAGCAA GGCGGTGGGC AAGGCGGCCG CGCGCGCGCC CGTGGTGCTG
CGCGGCGTGT CCAAGTGGTA TGGGCAGGTG CTCGGGGTGA CGCATATCGA CCTCGAGATC
GGCCCGGGCG TGGTCGCGCT GCTGGGGCCC AACGGCGCCG GCAAGTCGAC GCTGATGAAG
CTCATCGCCG GGCTGCTGCT GCCCTCGAAC GGTGAGGTGT TGGTGGCCGG GCGGCGGGTG
GCCGACGACC CGGCGGCGCG CGCCTCGCTG GGCTATTGCC CCGAGCACGA GGGCATGTAC
GACGCGCTCA CCGGGCTGGA GTTCGTGGCC ATGATGGCCC GGCTGTCCGG AATCCCGCGC
GCGCAGGCGG CCGAGCGCGC GGCCGAGGCG CTGCGCGGGC TGGGGCTGAG CGAGGCCATG
ACGCGGCCGC TGGGCGGCTA CTCCAAGGGC ATGCGCCAGC GCGCCAAGCT GGCGCAGGCG
ATGGTCCACG ATCCCCAGGT GCTGCTGCTC GACGAGCCGC TCACGGGCTG CGATCCCGTG
GCCCGCGCCG ACATCGTGCG CCAGGTGGAG GCGCTGGGCG CGGCCGGCAA GACGGTGCTG
GTGTCGAGCC ACATCCTGCC CGAGGTCGAG GCGATGACGC GCGAATTGGT GCTGATCCAT
CAGGGCAAGA TCCGCGCGCG CGGCAACGTC GGCCGCATCC GCGCGCTCAT CGACGCCCAC
CCGCACCGCA TCGAGGTGCG CTGCGAGCGG GCGCGCGAGC TGGCGCAGGC GCTGATCGCG
GCCGAGCACA TCACGCGCAT CGAGTTCGGC GAGGGCACGG TGGTGTTCGA GACCCACCAA
CCCGACGCCT GTTACGACGC CGTGGCCCGG GCCGCGCTCG ACACCGGGGT CGAGCTCACC
GGGCTCAGCT CGCCCGACGA CAACTTGCAG GCGGTCTTTG CCTATCTCAC CGAGTCGCCG
GGCGCCGAGG CGCGGGCGCG GCAGGCGAGC GGAGGCGGGC GATGA
|
|---|
| Protein sequence | MSEAASKAVG KAAARAPVVL RGVSKWYGQV LGVTHIDLEI GPGVVALLGP NGAGKSTLMK
LIAGLLLPSN GEVLVAGRRV ADDPAARASL GYCPEHEGMY DALTGLEFVA MMARLSGIPR
AQAAERAAEA LRGLGLSEAM TRPLGGYSKG MRQRAKLAQA MVHDPQVLLL DEPLTGCDPV
ARADIVRQVE ALGAAGKTVL VSSHILPEVE AMTRELVLIH QGKIRARGNV GRIRALIDAH
PHRIEVRCER ARELAQALIA AEHITRIEFG EGTVVFETHQ PDACYDAVAR AALDTGVELT
GLSSPDDNLQ AVFAYLTESP GAEARARQAS GGGR
|
|---|
| |