| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2220 |
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| Symbol | |
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| ID | 8544606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3085109 |
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| End bp | 3087895 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646386927 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003266658 |
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| Protein GI | 262195449 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.467526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTCTC TGCATTCGGG CGACCCTGTG AGTGAGCACA GCGACGCCCC CGAGAAGCCG
CTGCCGGACG AGGGCGACGA GGACGCGCTG CGACGCGAGC TGCATCTCCT GCGCGCAGCC
CTGCGCGCCG CGGGCGCTGG CACCTTCTAC GCCTTCGATC GCCAGCAGGT GTGGGACGCG
CGTTCGCGCG AGATCTTCGG CATCGCCGAG GACGCCCCCG ACCCCGACTT TCGCAACTGG
CTGCGCAGCA TCCACCCCGA CGACCGCGGC CGCGTCGTCG CCGAGCTCGA CGCCGCGCGG
CGTGCCGAGG AGCCCCACTG CCGCTGGGAC TATCGCGTGG TCCGCCCCGG CGGTGAGGTC
CGCCACGTGC GCGCCTTCGG CACCCTGGGG CGCACCCACG GCGGCGAGTT CCTGTACGTG
AGCGGCATGC ACTTCGACGT CACCGACGAG GTCGAGGCCC TGGCGCTGCG CGACGACCTC
GACCGCCGGC TGGCGTTCTT GCTCGAGGCC AACCCGGCCA TCCTCTATGT CCTCGACGTC
TCGGCCGCCA CCCGGATCGT CTACCTGAGC CCCAGCATCC GCGCCGTGCT CGGTTACGAC
CCCGAGGTGG TCATCGCGAC GCCGGGCTGG TGGCCCGATA CCCTGCATCC CGACGACCGC
GCGCGCGCCT TCTACGCCCT CGAGCACACC GTGCGCCAGG ACGGCCGGGC CACGGTCGTC
TACCGCATGC GCAAGGCCGA CGGCAGCTAT CTGTGGTTGC AGGACCAGCT CTCGCAGCCG
CATCCCGAGC GCCCGCACGT CATCATCGGC TGCCTCAGCG ACATCGCCGA TCGCATGCAG
ATCGAGGATG AGCTGGTGCA GGCGCGCGAG GACGCGCAGG CCGCCTCGCG GGTCAAGTCG
CAGTTTCTGG CCAACATGAG CCACGAGATC CGCACCCCGC TCAACGGCGT CCTGGGCATG
GCCGACCTGC TGCTCGACAC CGGTCTCTCG CCCGAGCAGC GCGAGCTGCT CGACGCCCTG
CAGTCCTCGG CCAACGCCCT GCGCGGCCTG ATCGAGGACG TGCTCGACAT CTCCAAGATC
GAGGCCGGCA AGCTCGAGAT CGAGGCGGTG TCGTTCCCGC TGCTCGAGCT GGTCTACGAG
GCCGCGCGCG CCATCGCCGT GCGCGCGCAA GAGCAGGGCC TCGAGCTCAT CGTCGACGCC
GAGCCCGCGC TGCCCGCGCG CGTGCTCGGC GACCCGGTGC GCTTCCGCCA GATCGTCCTC
AACCTGCTGT CCAACGCGGT CAAGTTCACG CCCGCCGGCG AGGTCGTGGT GCGCGTGCGC
CAGCGCGCGG ACGAGCACAT CGAACTCAGC GTGCGCGATA CCGGCGTCGG CGTGCCCGAG
GAGCGCCGCG AGGCCATCTT CGAGTCGTTC ACCCAGAGCG ACGGATCGAC CACGCGCCGC
TTCGGCGGCA CCGGCCTGGG CCTCACCATC TGCCGCGAGC TGGCCGAGCG CATGGGCGGC
AAGCTGTGGT ACGAGCCCGG CGACCAGGGC GGCAGCGTGT TCAGCGTATC GCTGCCGCTG
CCGCGCGCGG CCGACGACCC GCAAGACGCC GCCGCCGAGC GCGCGTGTGC CGGTCTGCGC
GATGTCCCCG CGCTCGTGGT CGCGCGCAAC CCCAGCATGC GCGCGGTGCT GGTCCGCCAC
CTCGAGGCCT GGGGCATGGC CGTGAGCGCC TGCGCCAGCG GCGACGAGGC CATCGCCCAG
GTGCAGCAGG CCGCGGCCGC CGGCCGCCCG GTGCGCGGCG CCGTGGTCGA CGACGACCTA
TCGGTGGCCG CGCGCCTGGC CGAGCAACCC GACGGCCAGG ACATCGCCCG GCTGGTGCTG
CTGCCGGCCG CCCGGCTGCG CGAGCTGCCG GTGCGCGACG GCCTCGGCGT GTCCCTGTGC
CTGACCAAGC CGGTGCTGCC GGCCTCGCTG CGCGGCAGCC TGCTGAGCTG CCTGGACGGC
GCGGGCGCCA GCGCCAGAGA CGCGATGCCG CGCCCGAGCG ACGGCCCGGC CCTGCCCGGC
GGCGGCTATC GCGTGCTGCT GGCCGAGGAC CACCCGACCA ACGCGCTGCT CACCCGGCGC
CTGCTCGAGC GCGCGGGCCA CGAAGTCGTA CAGGTGTCCA ACGGCCTCGA AGCCGTCGCC
ACCTGGGCGG CCCAGCGCTT CGATCTCGTG CTCATGGACA TCCAGATGCC CGAGCTCGAC
GGCCTCGAGG CCACCCGCCG CATCCGCAGC GAGGAGCGCG CGCGCGGCGG CTACACGCCC
ATCGTCGCGC TCACCGCCAA CACCCTCAAA GACGACGAGC AGCGCTGCCT CGACGCCGGC
ATGGACGCCT ACCTCGGCAA GCCGCTCGAG CGCCGCGCGC TGGCCTCGAT CCTGCGCGCG
CTGGCGCCCG CGCACCTGGC CCAGCCCGGC CCCGCGGCGG ACTTCGACTA CGAGGCCCTG
TGCGCGCGCC TCGGCGGCGA GGACGACATC GCGCTGATGA TCGTCGAGCA GTTTCTGATG
CGCGAGGCCG AGGCCTATCA GGCGCTGCAC GACGCCGTGG CCGGCGGCGA GCTCGAGCAC
ATCATGCACA CGGCGCATCG CACCAAGGGC ATGCTGCTCG ACCTCGAGGC GCGCTCGGCT
GCGGCCGCTA CCGAGGCTAT CGAGTACGCT GCCGCCCGCG GCGAGCGCGA CGCCATCGCC
GCGCCCTGGG CCACCATCGA GGCCGCGTGG GCGCCGCTGG TGGCCGCCTT GCGCGCCTTC
CTGGCCGGCG AGAGCGGCCG GCCTTGA
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| Protein sequence | MGSLHSGDPV SEHSDAPEKP LPDEGDEDAL RRELHLLRAA LRAAGAGTFY AFDRQQVWDA
RSREIFGIAE DAPDPDFRNW LRSIHPDDRG RVVAELDAAR RAEEPHCRWD YRVVRPGGEV
RHVRAFGTLG RTHGGEFLYV SGMHFDVTDE VEALALRDDL DRRLAFLLEA NPAILYVLDV
SAATRIVYLS PSIRAVLGYD PEVVIATPGW WPDTLHPDDR ARAFYALEHT VRQDGRATVV
YRMRKADGSY LWLQDQLSQP HPERPHVIIG CLSDIADRMQ IEDELVQARE DAQAASRVKS
QFLANMSHEI RTPLNGVLGM ADLLLDTGLS PEQRELLDAL QSSANALRGL IEDVLDISKI
EAGKLEIEAV SFPLLELVYE AARAIAVRAQ EQGLELIVDA EPALPARVLG DPVRFRQIVL
NLLSNAVKFT PAGEVVVRVR QRADEHIELS VRDTGVGVPE ERREAIFESF TQSDGSTTRR
FGGTGLGLTI CRELAERMGG KLWYEPGDQG GSVFSVSLPL PRAADDPQDA AAERACAGLR
DVPALVVARN PSMRAVLVRH LEAWGMAVSA CASGDEAIAQ VQQAAAAGRP VRGAVVDDDL
SVAARLAEQP DGQDIARLVL LPAARLRELP VRDGLGVSLC LTKPVLPASL RGSLLSCLDG
AGASARDAMP RPSDGPALPG GGYRVLLAED HPTNALLTRR LLERAGHEVV QVSNGLEAVA
TWAAQRFDLV LMDIQMPELD GLEATRRIRS EERARGGYTP IVALTANTLK DDEQRCLDAG
MDAYLGKPLE RRALASILRA LAPAHLAQPG PAADFDYEAL CARLGGEDDI ALMIVEQFLM
REAEAYQALH DAVAGGELEH IMHTAHRTKG MLLDLEARSA AAATEAIEYA AARGERDAIA
APWATIEAAW APLVAALRAF LAGESGRP
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