Gene Hoch_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2216 
Symbol 
ID8544602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3080416 
End bp3082245 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content71% 
IMG OID646386923 
Producthypothetical protein 
Protein accessionYP_003266654 
Protein GI262195445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.747974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.477626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CCAGCGCCCC CGAGAAGTTC ATCCTGCTGT CGCAGAGCGG CCTGTTCCCC 
ATCGCCCACG AGGACATGGC GCGGGCCGCC AGCGCCTACC ACCCCGGCTG CCTGCAGCGC
GAGCTGCAAC TCGACCTGCG CGAGGCCAGC GCGCACGCGC TCGCGAGCGG CGACTGGAGC
GCGGCCCGGC GCGCCGTGGA CGAGGCATTT GCCGCGCGCA TCGAGCCCGT GCGCGAGCAG
TGCCCCGGCT ACACCTTTCT CTACTTCGGT TCGGCCCCGG TGCCGCTGGC CTTTCACCTC
GGCACCCGGC TCGGCACCGG CGCGATCATC GACATCGTCC CGCGCGACCA CGCCACCGGC
GCCTGGCAGT GGCGCGAGCG CGCGCCGCGC GCCGAGCTGG TGCCCGCGAC CTTGCCGGAC
GAGCGCGATC GCAGCGAGGG CGTGGCCATC GTGCGGGTCT CGAGTTCCCA TCGCGTGGAC
CCGGTGCTCA CCCGCGAGCT GGTGCGCGAA CAGACCTACG AGACGCTCTT GTTCGAGGTC
GATATCGCCC TGCGCGCGCC CGCCGAGGAC GCCTTCTCCA ATGTCGCCGA GATGTGCGCG
CTCGCGGCCG AGTTTCGCCG CGTGCTCGAC GCCATCGGCG AGCGCTTCCC GGGCATCCGC
CGCGTGCACC TCTTCGCCTC GGTGCAGCCC GGCGTGGCCC TGCTCCTTGG CGCGCAGGTG
AGCCGCATGC ACCCCGAGAT CCAGACCTAC CAGTACCGGC GCGACGGCGA CCGCGGCGCC
CGCCACGAGC CCGCCCTGGT CAGCAATGGT CGGGGGCGCC GGCCGCCGCG CGTGCTCAGC
GATGACGAGA TCCAGCGCGC GGCACAGGAT CGCGTCCACC TGTCCGAAGA CCTCGAGCGC
ATGAAGGGCT TCGCGGACAA CGCCAGTGAG CGCTCGAACG CCACCGGCGA CACTTGGCTG
CACCAGGTGC TGGGGGCCCG CGAGAGCGAG CGCGCGCCCG CCCTGCAAGC GCCGCCCTGG
GCGTTCTTGC CGCCGCTGGT CAAGACCGAG CTCATGCGTA CCGAGATCGA GCGCGAGATC
ACGAGCGTGG ACGACAGCTT CTGCCTCGAC GCCGACAGCA AGCGCTGGCG ACTCGACGAC
CGCTGGCTGG CGCAGCTCGC CGAGCGCTTG CCCGACGACG GCGAGCGCCG CTGCGCCCTG
CGTCTGTTGC TGCTGCACGA AGCCGCGCAT CGCGGCCCGC AGGGCCTCAC CCGGGCCACC
AGCCAGGGCA TGGGCCGCTT CCCCAAGGTG CTCGAAGAGA TCGACTACCA CGCCGACCTG
TGGGCCATGC TGCACGAGCG TGCGCTCGAG GCGCTTCAGC CCACGCGCGG CGAACTGGGC
GATGTCGCCG GCTACTTCTG CAAGCTCATC GGCATCGCCA CCGAGACCAT GTGGGCCTTT
GACGACGGCG GCGAGCCGCT GCCCGAGATC CAGATCCGGC GCCTGAACCG CTACCTCATC
TGGTACTGGC AGTGGCTGCA CCTCAAGGTC GCGGGCCAGT CCAGCGGCAG CGAGCGGCTC
ACGCTCGCCG AGGCCCTGGA GATCTTGTCC AGCCGTCCGC ATATCGAGCT GGCCGGCCCG
CGCATCCGCG CGCACGATCA GCGCGTCTTC TACCTGCTCG AGGACCGGCC CTCGGTGCCC
GAGCTGGCCG TGTACCACGA GGGCAAGCTG TTCCGCTTCG GCCACACCTT GCCCTTCGAC
ATCCCCACGC TGCTCTCCGC CATCGCCGCG CGCGATGGCG AAGCCGCCCT CGAGATCCTG
CGGGCGGCTG CCGAGCACAT CCTGCGCTGA
 
Protein sequence
MTQASAPEKF ILLSQSGLFP IAHEDMARAA SAYHPGCLQR ELQLDLREAS AHALASGDWS 
AARRAVDEAF AARIEPVREQ CPGYTFLYFG SAPVPLAFHL GTRLGTGAII DIVPRDHATG
AWQWRERAPR AELVPATLPD ERDRSEGVAI VRVSSSHRVD PVLTRELVRE QTYETLLFEV
DIALRAPAED AFSNVAEMCA LAAEFRRVLD AIGERFPGIR RVHLFASVQP GVALLLGAQV
SRMHPEIQTY QYRRDGDRGA RHEPALVSNG RGRRPPRVLS DDEIQRAAQD RVHLSEDLER
MKGFADNASE RSNATGDTWL HQVLGARESE RAPALQAPPW AFLPPLVKTE LMRTEIEREI
TSVDDSFCLD ADSKRWRLDD RWLAQLAERL PDDGERRCAL RLLLLHEAAH RGPQGLTRAT
SQGMGRFPKV LEEIDYHADL WAMLHERALE ALQPTRGELG DVAGYFCKLI GIATETMWAF
DDGGEPLPEI QIRRLNRYLI WYWQWLHLKV AGQSSGSERL TLAEALEILS SRPHIELAGP
RIRAHDQRVF YLLEDRPSVP ELAVYHEGKL FRFGHTLPFD IPTLLSAIAA RDGEAALEIL
RAAAEHILR