Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2211 |
Symbol | |
ID | 8544597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3072326 |
End bp | 3073921 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646386918 |
Product | phytoene desaturase |
Protein accession | YP_003266649 |
Protein GI | 262195440 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.931782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.130578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACC CCGCGCAAGC GACCCGCGCC GCCGTCATCG GCAGCGGCTT TGGCGGCCTC GCCGCCGCCA TCCGGCTGCA GACCGCCGGC ATCCAGACCA CCCTGTTCGA GGCCCGCGAC AAACCCGGCG GCCGCGCCTA CGTGTACCAG CAGGACGGCT TCACCTTCGA CGGCGGGCCC ACCGTCATCA CCGCCCCGCA CTGCCTCGAG GAGCTGTTCA GCGAAGCCGG CCGCGACCTG GCCGACTACG TCGACATGCT GCCCGTGCAC CCCTTCTATC GCCTGGTCTG GTCCGACGGC GACAGCTTCG ACTACACCGG CGACAGCGCC AGCATGGAGG CCCAGATCCG CGCCCGCAAC CCGGCCGACG CCGAGGGCTA CCGGCGCTTC GTCGAGTACA GCAAGGAGGT CTTCGAGATC GGCTACGAGC AGCTCGTGGC CACGCCCTTC CTGCGGTTCT CGGACATGGT GAAGGTCGCC CCGCAGCTCG CCCGCCTGCG CGCCGACCGC TCGGTCTACA GCGCCGTGGC CCGCTTCGTC GAGGACGAGC ACGTGCGCCA GGCGCTGAGC TTCCACGCCC TCCTGGTCGG CGGCAACCCC TTCGAGACCA GCGCCATCTA CACCCTCATC CACTACCTCG AGCGCAAGTG GGGCGTGTTC TTCCCGCGCG GCGGCACCGG CGCCCTGGTG CAGGCGCTGG TGAAACTCTT CGAAGAGCTC GGCGGCGAGC TGCGCCTGTC CACCCCGGTG CGGCGCATCG ACCTGCGCCA GAGCCAGGGC CGCACCGTGC ACCGCGTGAC CACCGACGCC GCGCTCGCCG AGCCCTTCGA CCTGGTGGTG TCCAACGCCG ACCTGCACCA CACCTATTCC ACCCTCTACG CCGACCAGCC CGGCGCCGCC CGCACCGCGC GGCGGCTGGC CAAGATGGAC TGGTCGATGT CGCTCTTCGT CCTGTACTTC GGCACCGACC GCCCGTACCG CGACGAGGTC GTGCACCACA CCGTGGTTTT CGGACCGCGG TACCGCGAGC TGCTCGACGA CATCTTCCAC GGCCACGAGC TGCCCGAGGA TTTCAGCCTG TATCTGCACG CGCCCACGCA CACCGACCCG TCCCTGGCCC CCGAGGGCTG CGGCGCCTTC TACGTGCTGT CGCCGGTGCC GCACCTGGGC AACGCGCCCG TCGACTGGTC GCGCGTCGGC GCCCTGTACG CCGAGCGCAT CCTCACCGCG CTCGAGGACC TCATGCCGCG GCTGCGCGAG CACGTGGTCA CCAAGATGTG GATCACGCCC GACACCTTTC AGAGCGAGCT GCGCTCCTTC CAGGGCTCGG CCTTCTCGTG CGCGCCGCGG CTCACCCAGA GCGCCTACTT CCGCCCGCAC AACCGCGACC GCCGCATCCC GGGCCTGTAC CTGGTCGGCG CCGGCACCCA CCCGGGCGCC GGCGTACCCG GCGTGGTCAA CTCGGCCAAG GCCACCGTCG GCGTCGTGCT CGATGACCTC GGCCGCGGCG ACCGCGGCGG CCTCAGCGGC CGTGGCGGCC ACGGCGACCG CGGCGGTCGC GGCGACCGCG GCGGTCGCGG CGGAGCAGCC GCGTGA
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Protein sequence | MSNPAQATRA AVIGSGFGGL AAAIRLQTAG IQTTLFEARD KPGGRAYVYQ QDGFTFDGGP TVITAPHCLE ELFSEAGRDL ADYVDMLPVH PFYRLVWSDG DSFDYTGDSA SMEAQIRARN PADAEGYRRF VEYSKEVFEI GYEQLVATPF LRFSDMVKVA PQLARLRADR SVYSAVARFV EDEHVRQALS FHALLVGGNP FETSAIYTLI HYLERKWGVF FPRGGTGALV QALVKLFEEL GGELRLSTPV RRIDLRQSQG RTVHRVTTDA ALAEPFDLVV SNADLHHTYS TLYADQPGAA RTARRLAKMD WSMSLFVLYF GTDRPYRDEV VHHTVVFGPR YRELLDDIFH GHELPEDFSL YLHAPTHTDP SLAPEGCGAF YVLSPVPHLG NAPVDWSRVG ALYAERILTA LEDLMPRLRE HVVTKMWITP DTFQSELRSF QGSAFSCAPR LTQSAYFRPH NRDRRIPGLY LVGAGTHPGA GVPGVVNSAK ATVGVVLDDL GRGDRGGLSG RGGHGDRGGR GDRGGRGGAA A
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