| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2208 |
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| Symbol | |
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| ID | 8544594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3068332 |
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| End bp | 3069891 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 646386915 |
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| Product | L-seryl-tRNA selenium transferase |
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| Protein accession | YP_003266646 |
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| Protein GI | 262195437 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.223965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAAC CCAGCGACAG CGATACCGCC TCTCGCGGCG CGCGTGACAC CGGCGACCCT
GGGGCCGCGG CCGAGGCGCG CGCGGCCGCG TTCGCGCGTC TGCCCAAGAT CGACGCCCTG
CTGGCCCGTC CCGAGCTGGC CGCGCTGCCG CTGCCGCGCT GGGCTCTGCG CCAGGCCGCG
CGCGCCCTGG TCGACGCCCG CCGCGAGGCC GTGCGCCGCG CCAGCCCCGA GCGGGCCATG
GCCATCGCCA GCCGCGCGCT GCCGGCCGCC GACATCGAGC GCCGCGCCCG CGCCCTGTGC
GCGCCGCGGC TGCGCCCGGT CATCAACGCC ACCGGCGTGG TGCTGCACAC CAACCTCGGC
CGCGCGCCCC TGGGCACGCG CGCGCTCGAG CGCCTCGCCG CCATCGCCGG CGGCTACAGC
AACCTGGAAT TCGACCTCGC GTCCGGAATG CGCGGCTCGC GCCATCAGCA CGTCGGCGCG
CTGCTGGCCG CGCTCACCGG CGCCGAGGAC GCGCTCGTGG TCAACAACTG CGCCGCCGCC
GTCATGCTCG GCCTGTCGGC GCTGGCCGCC GGCCGCGAGG TCATCGTCTC GCGCGGCGAG
CTCATCGAGA TCGGCGGCTC CTTCCGCATC CCCGACGTCA TGCGCCTGTC GGGCGCGCGT
CTGGTCGAGG TCGGCACCAC CAACAAGACC CGGGCCCGCG ACTACGAGGC CGCCATCGGC
GACGACACCG CGCTGCTGCT CAAGGTGCAC CGCGCCAACT TCGCCATGCT CGGCTTCACC
GAGGAGCTGC CGCTGCGCGA GCTGGTGGCC CTGGGCCAGC GCGCCGGCGT GAGCACCATG
ATGGACCTGG GCTCGGGCTG GCTGCTCGCC GCCGCCGAGC TGCAGGCCCT CGGGCTGCAA
GGCGAACCCA GCGCGCCCGC GGCCGTCGCC AGCGGCGCCG ATCTCGTGTG CTTCTCCGGC
GACAAACTGC TCGGCGGCCC CCAGGCCGGC ATCGTATGCG GACGCGCGGA CGCCATCGCC
GCGCTGCGCG GCCATCCCCT GATGCGGGCG CTGCGCCCCG ACAAGCTGGC CCTGGCCGCG
CTCGAGGCCA CGCTCGAGGG GTATCGTGAC TGCGCCGCGG CCACGCCCGC GCACCTGGCC
GAGACCGCGC CCGTGCTGGC CATGCTCGCC GAATCCGCCG ACAGCGTCAG AGCCCGGGCC
GAGGCCGCGC TCACCCGCGT GCGCGCCGCC CGCAGCGCCG GCGCCAACCC CGCGGGCGAC
AGCGAAGGCG AGGGCGACGA TCCCGACGCC GACATCGACA TCGCGCTCAC CGCCTGCAGC
AGCCGGGTCG GCGGCGGCAC CTTGCCCATC GCCGAGCTGC CCTCGTGGGG CCTGGCCATC
ACCCCCGGCC GCGCCGCCGC GCGTTCGCTC GAGGAGCTGG CCGCGCAACT GCGCCAGGCC
GAGCCCGCCG TGGTCGCCCG CATCGCCCAG GAGCGCCTGA TCCTCGATCT GCGCACCGTG
CGCCCGGCCG AATTCGACCA CCTGGTCGCC GCCGTGCTCG CGCTCTTCGC CGCCCGCTGA
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| Protein sequence | MAKPSDSDTA SRGARDTGDP GAAAEARAAA FARLPKIDAL LARPELAALP LPRWALRQAA
RALVDARREA VRRASPERAM AIASRALPAA DIERRARALC APRLRPVINA TGVVLHTNLG
RAPLGTRALE RLAAIAGGYS NLEFDLASGM RGSRHQHVGA LLAALTGAED ALVVNNCAAA
VMLGLSALAA GREVIVSRGE LIEIGGSFRI PDVMRLSGAR LVEVGTTNKT RARDYEAAIG
DDTALLLKVH RANFAMLGFT EELPLRELVA LGQRAGVSTM MDLGSGWLLA AAELQALGLQ
GEPSAPAAVA SGADLVCFSG DKLLGGPQAG IVCGRADAIA ALRGHPLMRA LRPDKLALAA
LEATLEGYRD CAAATPAHLA ETAPVLAMLA ESADSVRARA EAALTRVRAA RSAGANPAGD
SEGEGDDPDA DIDIALTACS SRVGGGTLPI AELPSWGLAI TPGRAAARSL EELAAQLRQA
EPAVVARIAQ ERLILDLRTV RPAEFDHLVA AVLALFAAR
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