| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2202 |
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| Symbol | |
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| ID | 8544588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3059809 |
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| End bp | 3061353 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646386909 |
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| Product | D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- al anine-endopeptidase |
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| Protein accession | YP_003266640 |
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| Protein GI | 262195431 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0133766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGT CGGCCGCGCT CTCGCAACCT GCGGACGAAG ATGGCGCCGG CGAGGGCGAG
GAGCCCAGCG CGGTGCCGGC CTTCGATCCC GCGCCGCGGC GCTCGGGGAT CGGCATGGAA
GCCGCGGCGC TGTCGCTGGG CGCGCGCATC GACGCGCTGC TGGCCGGACA CGCCCCGCTC
ACCGACGCCC GCGTGGGCAT CTTCGTCCAG GATCTCGGCA CCGGCGCGGT GCTCTACGCG
CGCGAGGCCG GCAACAGCTT CAACGTGGCC TCGGTCACCA AGGTCATCAC CATGGCCGCG
TCGCTGGCCC TGCTCGGCCC CGACTTCCGC TACCGCACCG CGGTGCTGAC CGACAAGATC
GAGGGCAGCG TGGTCACGGG CAATCTGTAC CTGCAGCCGC GCGGCAACCC GACGCTGTCG
AGCGCCGATC TCGAGCTCCT GAGCACGCAT CTCGAGCGCG CCGGCATCAC CCAGATCCGC
GGCGAGCTGA TCGTCGACGC CGGCTACTTC GACGACGCCG CCTCGCCGCC GCACTTCGAC
GAGCAGCCCG AGGAGCAGGC CGCGTTCCGC GCGCCGGTGG GCGCCGCCAA CCTCGAGCGC
AACGCCTTCA CCGTGCGCGT GCGCGCGGCC CGGGCCGGCG GCCAGCGCGC GGCGGTGTGG
ATCGAACCGG AGACCAGCTA TGTGCGCCTG GGGCGCGACG AGGTCATCAC GCAGTCCAGC
GGCCGCGACT CGGTGCGCGT CGTCAGCAAG CTCGACGACG ACGGCCGCAT GGTGGTCGAC
GTGGTCGGCC GGGTGCGCGC TGGCTCGGAC ACCATGGGCT TTCGCCGCCG CATCGAGGAT
CCCGTGGCCT TTGCCGGCGA GACCTTCCGC GCGGTGCTGG CCGCGCGCGG GCTGCGCATC
CGCAAGCCCT CGCGCGCTGG CGAGGTGCCG AGCGACGCCC GGCTGCTGGC CACGGTGGAC
AGCGAGCCGC TCAGCGTCAT GGTCCAGCGC CTGGGCAAAT ATTCGGATAA CTTCGTGGCC
GAGACCCTGC TCAAGACCAT CGCCGCCGAG CACCGGGCCA ACGCCGACGC CGCGCCGCCG
GCGACCTGGG CCGAGGGCGT GGCCGCGGTC GAGCGCTTCC TGGTCGACCA AGTCGGCCTC
GACGACGACG CCTTCCGCTA CGAGAACGGC TCGGGTCTGT TCGACGCCAG CGGCTTCTCG
CCCGCCCAGG TGGGCGCGGT GCTGGCCGCG GCCCAGGGCG ATATGCGCTA CGGCCCCGAG
CTGATGTCGG CGCTGGCCAT CGCCGGTGTC GACGGCACGC TGCGCGGGCG CATGAAGCGC
ACCGACGCGC GCGGCCGCGT GCGCGCCAAG ACCGGCACCC TGGCGGCCGT CATCGCCCTG
GCCGGGTACA TCGACGCCGG GCCGCGGGCG CCCGCGGTCT TCGCCATCTT CGTCAACGAT
ATCGAGCCGC GCTGGATCGC GCGCACCGCC GCCCGCAGGC TCCAGGATCA GGTGGTCGAG
GCGGTCATCG AGCACCTCGA GACGGTCCGG CCGCCGGCCC GCTGA
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| Protein sequence | MSASAALSQP ADEDGAGEGE EPSAVPAFDP APRRSGIGME AAALSLGARI DALLAGHAPL
TDARVGIFVQ DLGTGAVLYA REAGNSFNVA SVTKVITMAA SLALLGPDFR YRTAVLTDKI
EGSVVTGNLY LQPRGNPTLS SADLELLSTH LERAGITQIR GELIVDAGYF DDAASPPHFD
EQPEEQAAFR APVGAANLER NAFTVRVRAA RAGGQRAAVW IEPETSYVRL GRDEVITQSS
GRDSVRVVSK LDDDGRMVVD VVGRVRAGSD TMGFRRRIED PVAFAGETFR AVLAARGLRI
RKPSRAGEVP SDARLLATVD SEPLSVMVQR LGKYSDNFVA ETLLKTIAAE HRANADAAPP
ATWAEGVAAV ERFLVDQVGL DDDAFRYENG SGLFDASGFS PAQVGAVLAA AQGDMRYGPE
LMSALAIAGV DGTLRGRMKR TDARGRVRAK TGTLAAVIAL AGYIDAGPRA PAVFAIFVND
IEPRWIARTA ARRLQDQVVE AVIEHLETVR PPAR
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