Gene Hoch_2199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2199 
Symbol 
ID8544585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3057678 
End bp3058547 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content70% 
IMG OID646386906 
Productglycosyl transferase family 2 
Protein accessionYP_003266637 
Protein GI262195428 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0107343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCCCC CTGATATCGA TATTCTTCGT CCACGCGCCG CCTGCGCCTC GCCGTCGATC 
TCGGTGATCA TCCCCGCGTT CAACGAAGCC GGGCGCATCG GCCCCTACCT CGAGGCGATC
GCCCACTACT TCGCCGGGCG CGATGAGAGC TACGAGCTGT GGGTCGTGGA CGATGGCAGT
GACGACGACA CCGCCGCGCT GGTGCGCACG CGCGCCGAGC ACGATGCTCA TCTAGGACTG
TTGCGCTACC CGCGCAATCG CGGCAAAGGC TACGCCGTGC GCGCCGGCAT GCAGATGGCG
CGCGGGGCGC TGCGCCTGTT CGCCGATGCC GACGGCAGCA CGCCCATCGC TGAAATCGAG
CGCCTGCGCC GCGCCATCGA AGCTCGCGGC GTGGATGTCG CCATCGGCTC GCGCGCGCTC
GCGTCCGACG AAGTCGTACG CGTGGTCAAA TCGCACCGGC GCATCATCGG CGAATGCTTC
CGCCTGCTGC GCCGGGCCGT CCTGCACACC GATATCCTCG ACAGTCAGTG CGGTTTCAAA
TTGTTCACGG CGACGGCCGC GCGGCGTCTA TTCGCCGCGG CCCAACTCGA CGGCTTCGCC
TTCGACGTCG AGCTGCTCAG CCTGGCCGCG CGCGCCGGCA TGCGCGTGGA AGAGGTGGCC
GTCAACTGGA GCGACACGCC GCGCTCGCGC GTCAACCTGC TGGTCGATCC GGCGCGCATG
CTGCGCGACA CTCTGCGCGT GCGCCGCCTG CACCGCGACA CCCGGCTGAT GACGCGGGCC
GAAGCCGAGC GCGCGGAAGC CGCCCGATCC GACCTCTCTA TCGACCACGC GGCCGGCGGC
GATGGCAGCG ACGCGACCCC GACGCGCTGA
 
Protein sequence
MLPPDIDILR PRAACASPSI SVIIPAFNEA GRIGPYLEAI AHYFAGRDES YELWVVDDGS 
DDDTAALVRT RAEHDAHLGL LRYPRNRGKG YAVRAGMQMA RGALRLFADA DGSTPIAEIE
RLRRAIEARG VDVAIGSRAL ASDEVVRVVK SHRRIIGECF RLLRRAVLHT DILDSQCGFK
LFTATAARRL FAAAQLDGFA FDVELLSLAA RAGMRVEEVA VNWSDTPRSR VNLLVDPARM
LRDTLRVRRL HRDTRLMTRA EAERAEAARS DLSIDHAAGG DGSDATPTR