| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2178 |
|---|
| Symbol | |
|---|
| ID | 8544564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3029615 |
|---|
| End bp | 3031411 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646386885 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003266616 |
|---|
| Protein GI | 262195407 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.194105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGC GTCTGCTCGG CGCTGCCATC GCCGTGGTGC TGGCGCTGCT CAGCTTCGCC
TGGGTGATGG ACGCGCAGCG CGAGGTCGGC CTGGTGCGCG ACGAGCTGGT GTACATGCAC
CACGGCAGCC GCTACGCCGA CTGGTGGATG GGCGTGCTCG ACGGCCGCGA CGGCATGCTG
TCGGCCGACA CCATCACGCG CCACTTCGGC GGACCCGGCG CCACCTCCAA CAACCGCGAG
CACCCGCCGC TGATGAAGAC CCTCTTCGGC CTGTCCGAGC GGCTGCTGCA CCGCGAGCTC
GGCTGGCTCG ATCGCGTCAG CGCCTACCGC GCGCCCGCGG CGGCCATGAA CGGGCTGCTC
GTGGCCCTGG TGTTCTTGTT CGCGGCCGGG CTGTGGGGGC GCGGCGTCGG TCTGGTGGCC
GCGCTGCTCA CCCTGTTGGC GCCGCGGCCG TTTTTCCACG CCGGTCTGGC GACCTTCGAT
GGCGCCGTGG TCACCATGTG GTTCGCCGTC CTCTACGCGT ACCTGCGCGC GCTGGCGTCG
CGGCCGTGGT GCGTGGTGCT CGGTGTGCTC TACGGCCTGG CGCTGGCGAC CAAGCACAAC
GCCCTGATGA TGCCGGCGGT GCTGCTGCCG CACTACCTGT ACCTGAGCGT GCGCCGCGGT
CGCGCCCTCC AGGGCGATGC GCCCGCGCCC GGAGTCGGCG GCTGGCTGCG TGCGCTGGGG
CGCGGGTTCT TGGACCTTCG TCCGAGTTCG GTGCTCGCCT GCGTGCTGCT GGGGACGCTG
TGCTTCGTCG CCCTGTGGCC GTGGCTGTGG TTCGACACCG TGGCCCATAT CGGCGACTGG
GTGCGCTTTC ACCTGCACCA TGTCCACTAC AACTTCGAGT ATCTGGGGCG CAACTGGAAC
GCGGCGCCGT ATCCCTGGCA CGTGCCGCTG GTGACCACGG CGCTGACCGC GCCGGTCATC
ACGCTGGTCG CCGCGCTGTG GGGCGGCGCG CTGCTGCTCG CGCGCCGTTG CTCGGACTGG
GCGCGGGCGG CGCTGCCGCC GCGACTGACG GCGGATGCCG AGAGGATTTT GGACGATCGG
GCGAGCTCGC GAGCGCCCGC GCTGCTGCTC GCGCTCTCGG CGCTGGTCGC GATCGCGCCC
TTTGCGCTCG GGCATTCGCC GATCTTCGGC GCCGAGAAGC ACTGGGCCGC CATCATGCCC
AGCGTGAGCA TCTTTGCCGC GCTCGGTGTG TTCGCGGCCG CGCGCGCGTT TGGCGCTGCC
TGGGGCGCAT TGCGCCCGGC GTCGTCGTCG TCGGCGGCGG CGGCGGCGTC CGCGACCGCC
GCGTCGGGGG TGACGGCGCT GGCCGCCGCG ATCCTGGCCT GCGCGGCCGT GGCCGCGGCC
GCAGCCGAGA CCGTACGCGC GCAGCCCTAC GCGCTGAGCT ACTACAACGC GCTCGCCGGC
GGCGCGCCCG GCGGTGCCGA CCTGGGCATG AATCGCCAGT TCTGGGGCTA TTCGGCGCGC
GGCGTGCTGC CCGAGTTGAA CCAGCGCGCC GCCCAGGCCG GGCGCTCGCT GCCCGTGTAC
ACGCACGACG CCGCGCCGGC CTGGGGGCGC TACGCGGCCG AAGGGCTGCT GGCGCCCGAT
CTCCCCGACG CGGGACACGA GCGCGGCGGC GTAGCGCGCT CGAAGCTGGC GCTGGTGATT
CACGAGCGCC ACTTCCTGCG CCACGACTAC ATGATCTGGG ACGTATTCGG AACCGTGCAG
CCAGTCTACG TGCTCACCTT CCAGGGCGTG CCGCTGGTGA GCGTGTACGC GCGCTAG
|
|---|
| Protein sequence | MRSRLLGAAI AVVLALLSFA WVMDAQREVG LVRDELVYMH HGSRYADWWM GVLDGRDGML
SADTITRHFG GPGATSNNRE HPPLMKTLFG LSERLLHREL GWLDRVSAYR APAAAMNGLL
VALVFLFAAG LWGRGVGLVA ALLTLLAPRP FFHAGLATFD GAVVTMWFAV LYAYLRALAS
RPWCVVLGVL YGLALATKHN ALMMPAVLLP HYLYLSVRRG RALQGDAPAP GVGGWLRALG
RGFLDLRPSS VLACVLLGTL CFVALWPWLW FDTVAHIGDW VRFHLHHVHY NFEYLGRNWN
AAPYPWHVPL VTTALTAPVI TLVAALWGGA LLLARRCSDW ARAALPPRLT ADAERILDDR
ASSRAPALLL ALSALVAIAP FALGHSPIFG AEKHWAAIMP SVSIFAALGV FAAARAFGAA
WGALRPASSS SAAAAASATA ASGVTALAAA ILACAAVAAA AAETVRAQPY ALSYYNALAG
GAPGGADLGM NRQFWGYSAR GVLPELNQRA AQAGRSLPVY THDAAPAWGR YAAEGLLAPD
LPDAGHERGG VARSKLALVI HERHFLRHDY MIWDVFGTVQ PVYVLTFQGV PLVSVYAR
|
|---|
| |