| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2163 |
|---|
| Symbol | |
|---|
| ID | 8544549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3006338 |
|---|
| End bp | 3007051 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646386870 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_003266601 |
|---|
| Protein GI | 262195392 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.163998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA GCACCCAGAA GGTTTCCTGG AGCGTGGACG GCCGCGAATT CGAAGGCCAC
GCGGCGTGGC AAGGAGACGC CCCCAAACCG GCCGTACTGG TCTGCCACGC GTGGGCCGGA
CAGAGCGACA GCGAACGCGC GTTCGCCGAG GAGCTGGCCG AGCTCGGCTA CGTGGGCATG
GCCATGGACG TCTACGGCAA GGGCGTCCTC GGCAGCAACA AGGACGAGAA CAGCGCGCTC
ATGATGCCGC TGCTCGAAGA CCGCGCCCTG CTCGAGAGGC GCCTGCGCGC CGGCCTCGAC
GCGCTGCGCG CGCTGCCCGT GGTCGCCGGG GACAAGGTCG CCGCCCTCGG CTTCTGCTTC
GGCGGCCTGT GCGTGCTCGA CATCGCGCGC AGCGGCGCCG ATGTGCGCGG CGTGGTCTCG
TTCCACGGCA TCTTCCGACC CCGGCCCATG CCCAACCAGG ACATCGGCGC CAAGGTGCTG
GTGCTGCACG GCTACGACGA CCCCATGGCC AAGCCCGACG CCCTGCTGGC GCTGTGCAAG
GAGCTGAGCG ACGCTGGCGC CGACTGGCAG GTGCACGCCT ACGGCGGCAC CATGCACGCC
TTCACCAACC CGGAAGCCGA CGATCCCGAT TTCGGCACGG TGTACGACAA AGACGCCGAC
CGCCGCGCCC GGCACGCCAT GCGCTACTTC CTCGAAGAGA TTTTTTCGGA CTGA
|
|---|
| Protein sequence | MTTSTQKVSW SVDGREFEGH AAWQGDAPKP AVLVCHAWAG QSDSERAFAE ELAELGYVGM
AMDVYGKGVL GSNKDENSAL MMPLLEDRAL LERRLRAGLD ALRALPVVAG DKVAALGFCF
GGLCVLDIAR SGADVRGVVS FHGIFRPRPM PNQDIGAKVL VLHGYDDPMA KPDALLALCK
ELSDAGADWQ VHAYGGTMHA FTNPEADDPD FGTVYDKDAD RRARHAMRYF LEEIFSD
|
|---|
| |