Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2146 |
Symbol | |
ID | 8544532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2978447 |
End bp | 2979931 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646386853 |
Product | hypothetical protein |
Protein accession | YP_003266584 |
Protein GI | 262195375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00352801 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGG ATATGCGCGG ACCCGGCACG ACGAGACCAG CAAACGGCAA GCGGGGGGCG CTGTCCTTCG CCTGCATCGC GGCCATCGCC AGCCTGGCGA GCGGCTGTGT CATTGAATGG CCCTTAGATC CTGAGCCCGT GCCTCCGGGC GTGCCGGTAC CGCCGCCGCC GCCCGAGGGC GACACCCGCG TGGTCTGGGA GCTCATCGGC GACGGGGGCC AGAGCTGCTT CGCGTCCACC GACGACGCTG CGCCCTTCGC CGTCTGTGCC GAGACCTTCA ACGACGGCGA TCCCGTCTAC GGCTTCCTCC GCGTCGATAC CAGCTACGAG GTGCGCGACC TCGACTTCTA CGACCTCTGC GGCGGCGACA TGGAGTTCTT CGATTTCGGC CCCTATGGGC TCGAGTTCTA CTGGTATCCC AACGCCAGCA GCGGCGAGCG CTGTCCGCTC AACCTGTCGG TGTTCAGCTA CGACGACGTC GGCCGCGATT TCCTCCTCGA GGTCGGCTTC GGCGACCAGC CGCCGCCGCA GAAGGGCGCC TACTGGGAGC TGTTCCACAG CGAGGGGAGC TGCGTCGGCG AGCCGGACAG CGCCGAGCTG TCGTGCAACG CCGAGGTGCG ACCCGGCGAC GTGGTCACCG GCCTGGCCTT CTTCGAGGCC GGGACCGACA TTCGAGGTCT GGGTCTGCGC GACACCTGCG GCGGTGAGCT GCTCGACGTG TTCACCGATC ACCGCGGCGT GCTCGAGTTC GTATGGCAGG TGCCGATGAC GCGCGGCTGC GAGCTGGCGC TGATGGTCGT GGACGAAGGC GGCCAGGCCA GCGAGCACAG CGTGCGCGTG CCCATGGCCG AGTTTGTCGC GCCGAGCGTG GGGCCGTGGG TGGAATGGGA TCTGCGCGGC AGCGGGGTTC GATGCTCGGC CGTCGCGGCT GCGGATGGCA GCATCGCGTG TGATGAGTCC TTCGTGGCCG GCAGATCGAC CGAACTCTAC GTTCAGGTCC ATGACGAGGA CGCGCAGGTC AAGAGCCTGG AACTCGTGAA CGATTGCGAT GGCGGATGGC TGCGGGGCAT CTCGGAGGTG GACAGCGGCG AGTACGAGTT CGAGTGGATA CCGCCGAGCG AGGCCCGCGC CGAGTGCGCG CTGCGTCTGC GCCTCGAGAA CCACGACGGC ACCGTGCTCG AGCTGCCGGT GGGCGTGAGC GTGGCGCTGC CCGGCAGCGG CGAGCCCGAG CTGGACTGGG ACATCGACGA CGCCCAGGCC GGCAGCGCGA TCGGCTTCTC GGCCAGCATC GACTGGAATG GCCCCAGCGG CGACTACATC GTGGTCAGCT CGTGCGGCGG CGAGATGTCG CTCACGCCCG GTGCCCGCGA GCTCCAGGGC GTGTGGGCGA CGCCGCAGAC CTCCGGCACC TGTGAGCTGT CGATGTTTCT TTTTGGCGCC GATGGTCGGA CGCACGTCCG GCCGGTCGAG ATGCAGCTCG AGTAG
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Protein sequence | MTSDMRGPGT TRPANGKRGA LSFACIAAIA SLASGCVIEW PLDPEPVPPG VPVPPPPPEG DTRVVWELIG DGGQSCFAST DDAAPFAVCA ETFNDGDPVY GFLRVDTSYE VRDLDFYDLC GGDMEFFDFG PYGLEFYWYP NASSGERCPL NLSVFSYDDV GRDFLLEVGF GDQPPPQKGA YWELFHSEGS CVGEPDSAEL SCNAEVRPGD VVTGLAFFEA GTDIRGLGLR DTCGGELLDV FTDHRGVLEF VWQVPMTRGC ELALMVVDEG GQASEHSVRV PMAEFVAPSV GPWVEWDLRG SGVRCSAVAA ADGSIACDES FVAGRSTELY VQVHDEDAQV KSLELVNDCD GGWLRGISEV DSGEYEFEWI PPSEARAECA LRLRLENHDG TVLELPVGVS VALPGSGEPE LDWDIDDAQA GSAIGFSASI DWNGPSGDYI VVSSCGGEMS LTPGARELQG VWATPQTSGT CELSMFLFGA DGRTHVRPVE MQLE
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