Gene Hoch_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2146 
Symbol 
ID8544532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2978447 
End bp2979931 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content69% 
IMG OID646386853 
Producthypothetical protein 
Protein accessionYP_003266584 
Protein GI262195375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00352801 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGG ATATGCGCGG ACCCGGCACG ACGAGACCAG CAAACGGCAA GCGGGGGGCG 
CTGTCCTTCG CCTGCATCGC GGCCATCGCC AGCCTGGCGA GCGGCTGTGT CATTGAATGG
CCCTTAGATC CTGAGCCCGT GCCTCCGGGC GTGCCGGTAC CGCCGCCGCC GCCCGAGGGC
GACACCCGCG TGGTCTGGGA GCTCATCGGC GACGGGGGCC AGAGCTGCTT CGCGTCCACC
GACGACGCTG CGCCCTTCGC CGTCTGTGCC GAGACCTTCA ACGACGGCGA TCCCGTCTAC
GGCTTCCTCC GCGTCGATAC CAGCTACGAG GTGCGCGACC TCGACTTCTA CGACCTCTGC
GGCGGCGACA TGGAGTTCTT CGATTTCGGC CCCTATGGGC TCGAGTTCTA CTGGTATCCC
AACGCCAGCA GCGGCGAGCG CTGTCCGCTC AACCTGTCGG TGTTCAGCTA CGACGACGTC
GGCCGCGATT TCCTCCTCGA GGTCGGCTTC GGCGACCAGC CGCCGCCGCA GAAGGGCGCC
TACTGGGAGC TGTTCCACAG CGAGGGGAGC TGCGTCGGCG AGCCGGACAG CGCCGAGCTG
TCGTGCAACG CCGAGGTGCG ACCCGGCGAC GTGGTCACCG GCCTGGCCTT CTTCGAGGCC
GGGACCGACA TTCGAGGTCT GGGTCTGCGC GACACCTGCG GCGGTGAGCT GCTCGACGTG
TTCACCGATC ACCGCGGCGT GCTCGAGTTC GTATGGCAGG TGCCGATGAC GCGCGGCTGC
GAGCTGGCGC TGATGGTCGT GGACGAAGGC GGCCAGGCCA GCGAGCACAG CGTGCGCGTG
CCCATGGCCG AGTTTGTCGC GCCGAGCGTG GGGCCGTGGG TGGAATGGGA TCTGCGCGGC
AGCGGGGTTC GATGCTCGGC CGTCGCGGCT GCGGATGGCA GCATCGCGTG TGATGAGTCC
TTCGTGGCCG GCAGATCGAC CGAACTCTAC GTTCAGGTCC ATGACGAGGA CGCGCAGGTC
AAGAGCCTGG AACTCGTGAA CGATTGCGAT GGCGGATGGC TGCGGGGCAT CTCGGAGGTG
GACAGCGGCG AGTACGAGTT CGAGTGGATA CCGCCGAGCG AGGCCCGCGC CGAGTGCGCG
CTGCGTCTGC GCCTCGAGAA CCACGACGGC ACCGTGCTCG AGCTGCCGGT GGGCGTGAGC
GTGGCGCTGC CCGGCAGCGG CGAGCCCGAG CTGGACTGGG ACATCGACGA CGCCCAGGCC
GGCAGCGCGA TCGGCTTCTC GGCCAGCATC GACTGGAATG GCCCCAGCGG CGACTACATC
GTGGTCAGCT CGTGCGGCGG CGAGATGTCG CTCACGCCCG GTGCCCGCGA GCTCCAGGGC
GTGTGGGCGA CGCCGCAGAC CTCCGGCACC TGTGAGCTGT CGATGTTTCT TTTTGGCGCC
GATGGTCGGA CGCACGTCCG GCCGGTCGAG ATGCAGCTCG AGTAG
 
Protein sequence
MTSDMRGPGT TRPANGKRGA LSFACIAAIA SLASGCVIEW PLDPEPVPPG VPVPPPPPEG 
DTRVVWELIG DGGQSCFAST DDAAPFAVCA ETFNDGDPVY GFLRVDTSYE VRDLDFYDLC
GGDMEFFDFG PYGLEFYWYP NASSGERCPL NLSVFSYDDV GRDFLLEVGF GDQPPPQKGA
YWELFHSEGS CVGEPDSAEL SCNAEVRPGD VVTGLAFFEA GTDIRGLGLR DTCGGELLDV
FTDHRGVLEF VWQVPMTRGC ELALMVVDEG GQASEHSVRV PMAEFVAPSV GPWVEWDLRG
SGVRCSAVAA ADGSIACDES FVAGRSTELY VQVHDEDAQV KSLELVNDCD GGWLRGISEV
DSGEYEFEWI PPSEARAECA LRLRLENHDG TVLELPVGVS VALPGSGEPE LDWDIDDAQA
GSAIGFSASI DWNGPSGDYI VVSSCGGEMS LTPGARELQG VWATPQTSGT CELSMFLFGA
DGRTHVRPVE MQLE