Gene Hoch_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2136 
Symbol 
ID8544522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2962308 
End bp2963621 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content68% 
IMG OID646386843 
ProductPeptidase M23 
Protein accessionYP_003266574 
Protein GI262195365 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGTCA ACCTCTACGT GTTCCTGTGG CGGGGCGATA CGTCGATCCC GGCGGTGATG 
GAGCAGGCGG CGATGGCCGG GCACGAAGAT TCCGGCAAGG CCGAGAACAG CGCCGAAGGC
AAGGGCGAGG GCGAGGAGGC CGCGGAGGAC GGCGAGGCCG AGGCCGAAGC CGAGATCGCG
AGCGGCGAGC CGCGCTGGGT CGATGGCGAG GTGCAGTCGG GCGACAGCAT GGGCGGCATC
CTGCGCCGCG AGGGCATGAC GCCGCCCGAG GCCGACGAGC TGATCCGCGC GCTGCGGGAT
CACATGGATC TGCGCAAGAT CCGCCCGGGC CAGAGCTACC GGCTGCGCTT CGACGCCGCC
GGGCACCTGG AGCTGTTTGA GTTCGAGGTC TCGCGCACGA CCAAGGTGCG GGCCGAGCGC
GACGCCGACG GCACCCTGGT CGGCCGCGAA GACAAGGCCG AGACCGAGGT CCGCATCGAG
GAGATCGGCG GCCGGGTCGA GTCATCGCTG CACGCGACCA TGTCGCGGGT GGGCGAGGAT
CCCAGCCTGG TGGCCTTTTT CGCCGACGTC TTCGCCTACG ACGTCAACTT CTTCACCGAC
ACGCGCGCGG GCGACAGCTT CCGCATCATC GTCGAGAAGG AGTACCTCGA GGGCGATTTC
TATCGTTATG GACGGGTGCT GGCCGCGCAG TACAGCGGTC ACGTCGGCAC CTTCGACGCC
TTTTTGTGGA ACGACCCGCG CACCCGCGAG GACGCGTACT ACGACTCCGA GGGCCGCAGC
GTCGAGAAGA GCCTGCTCAA GACGCCGCTC AAGTTCACGC GCATCTCGTC GAAGTTCAAT
CCCAAGCGCA TGCACCCGGT GCTGCACACC GAGCGCGCTC ACATGGGCGT GGACTACGCG
GCGCCCACGG GAACGCCGGT GTGGGCCGCC GCCAGCGGGC GCATCGTCGG TCGCCGGCCC
ATGGGTGGCG CGGGCAACTG CGTGATCCTG CAGCACGACA ACGGGCTGCA GACGGTCTAC
ATGCACCTGT CGAAGTTCGC CAAGGGCCAG CGGGTCGGCG AGCACGTCAA GAGCAAGACG
GTCATCGGCT ATGTCGGCGC GACCGGTCTG GCGACCGGTC CGCATCTGCA TTTCGGCGTC
AAGGAGAAGG GCCGCTACGT CGATCCCATG ACGCTGAAGA TGGCCCGCGG CGCCAGCGTG
CCGCGCAAGT ACCGGGCGAA GTTCAACGCC GAGATGGAGC GCCTGGCCGA GCGGCTGCGG
CGCGTTCCTG TGGATGCGGG GCAGCAGCAA ATGCTGGTCC AAAGCGGGAA TTGA
 
Protein sequence
MGVNLYVFLW RGDTSIPAVM EQAAMAGHED SGKAENSAEG KGEGEEAAED GEAEAEAEIA 
SGEPRWVDGE VQSGDSMGGI LRREGMTPPE ADELIRALRD HMDLRKIRPG QSYRLRFDAA
GHLELFEFEV SRTTKVRAER DADGTLVGRE DKAETEVRIE EIGGRVESSL HATMSRVGED
PSLVAFFADV FAYDVNFFTD TRAGDSFRII VEKEYLEGDF YRYGRVLAAQ YSGHVGTFDA
FLWNDPRTRE DAYYDSEGRS VEKSLLKTPL KFTRISSKFN PKRMHPVLHT ERAHMGVDYA
APTGTPVWAA ASGRIVGRRP MGGAGNCVIL QHDNGLQTVY MHLSKFAKGQ RVGEHVKSKT
VIGYVGATGL ATGPHLHFGV KEKGRYVDPM TLKMARGASV PRKYRAKFNA EMERLAERLR
RVPVDAGQQQ MLVQSGN