| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2134 |
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| Symbol | |
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| ID | 8544520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2957685 |
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| End bp | 2959628 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646386841 |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_003266572 |
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| Protein GI | 262195363 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.208796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA GCAGTTACAC CGCTCAAGAC ATCACCGTTC TCGAAGGCCT CGAGCCGGTG
CGCAAGCGCC CGGCGATGTA CATCGGCGGC ACCGACAAGG TCGGCTTTCA TCATCTGCTG
TGGGAGATCG TCGACAACTC CATCGACGAG GTCATCAACA AGCACGCCAC CCGCGTCGAC
GTCACCCTGC ACGACGACGG CACCCGGGTC ACGATCGAGG ACAACGGCCG CGGCATCCCC
ATCGACACCC TGCCCAAGTA CAAGAAGCCG GCGCTCGAGA TCATCATGAC CACCCTGCAC
GCGGGCGGTA AGTTCGAGCG CGGCAAGAAC TACAAGCACT CGGGCGGCCT GCACGGCGTC
GGCGCCTCGG TGGTCAACGC GCTGTCCTCG GAGCTCATCG CCGAGGTCAA ACGCGACGGC
GACCTCTACC AGCAGACCTA CGAGCGCGGC GTGCCCACCG GCAAGATGAA AAAAGCCGGC
AGCTCGCGCG GCTCGGGCAC AATCATCACC TTCACGCCCG ACCCGCAGAT CTTCGGCAAG
AAGCAGCGCT TCGACGCCAA GCACATCGCC GAGCGCCTCG AGGCCAAGAG CTACCTGCAC
CGCGGCGTCA AGCTGGTCCT GCACGACAAG CTGTCCAAGC CCAACGCCAC GCACACCTAC
CAGCACGACC AGGGCATCGC CGAGTACCTG AGCAAGCTGC TCGGCGACCG CCAGTACCCG
ACCGTGCCCA CCAAGATGGA CGGGCTGTAT TTCGAACGCG CGGGCGAAGA AGACGGCGAC
ATCGATCTCG AGGTCGCCCT GGTGTGGACC GAGGCGCCCG ACGAGTACAT CCGCTCGTAC
GTCAACGGCA TCCCCACGCC GGCCGGCGGC ACCCACGAGC AGGGCCTCAA GAGCGCCGTG
GTCAAGGGCA TGCGCAACTA CATGAACACC CACAAGCTGG TGCCCAAAGG CATCACGCTC
ACGGCCGAGG ACATCCGCGA AGGCCTGGTG GTCATCCTCT CGTGCTACGT CGGCGACCCG
CAGTTCCAGG GCCAGACCAA GCAGCGGCTC AACAACACCG AGGTCAGCGC CCAGGTCGAC
GGCGCCCTGC GCCCGGCCAT CGAGCGCTAC TTCAACCAGA ACCAGAACAT CGCCGAGGCC
GTGGTCGCGC GCATGATCCT GGCCGCCCGC GCGCGCATCG CCTCGCGCGC GGCCTCGCAG
GCGGTGTCGC GCAAGACCGC GGTCTCGCAC CGCCTCAACC TGCCGGGCAA ACTCGCCGAC
TGCTCGTCTA CCAACCCGGG CGACAGCGAG CTGTTCATCG TCGAGGGCGA CTCGGCCGGC
GGCTCGGCCA AACAGGGCCG CGATCGCCGC ACCCAGGCCA TCCTGCCGCT GCGCGGCAAG
GTGCTCAACG CCGAGCAAGC GTCGACGCAG AAGCTCCTGG CCAACAAGGA GCTGAGCGAC
ATCGTGTCAG CGCTGGGCTG CGGCATGGGC CCAAAGCTCG ACCTCTCGCG CCTGCGCTAT
GGCAAGATCT TCCTGCTCAT GGACGCCGAC GCCGACGGTC ACCACATCGC CACCCTGCTG
CTCACCTTCT TCTATCGGCA CATGCGCCAG CTCATCGACC ACGGCCACGT CTACCTCGCG
CAGCCGCCCC TGTACCGCAT CGACCTGGGC AAAGAGACCT TCTGGGCGCT CGATGATATC
CACAAGGACC AGATCCTGGC CAACGCCCGC AGCAACGCCA AACCCAACAT CACGCGCTTC
AAAGGTCTGG GCGAGATGAA CCCCTCGGTG CTCAAGAAGA CCACGCTCGA CCCGCGCTAT
CGCAGCGCGC TGCGCATCAC GGTGCCGGAG GGTGAGGCCC TGGGTACCGA TCAGACCATC
GCCCAGCTCA TGGGCAAAGA CGCCTCGGCG CGCTACGACA TCATCACCGA CGGCATTCAC
GAAGTAGACG AACTGGACGT GTGA
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| Protein sequence | MAQSSYTAQD ITVLEGLEPV RKRPAMYIGG TDKVGFHHLL WEIVDNSIDE VINKHATRVD
VTLHDDGTRV TIEDNGRGIP IDTLPKYKKP ALEIIMTTLH AGGKFERGKN YKHSGGLHGV
GASVVNALSS ELIAEVKRDG DLYQQTYERG VPTGKMKKAG SSRGSGTIIT FTPDPQIFGK
KQRFDAKHIA ERLEAKSYLH RGVKLVLHDK LSKPNATHTY QHDQGIAEYL SKLLGDRQYP
TVPTKMDGLY FERAGEEDGD IDLEVALVWT EAPDEYIRSY VNGIPTPAGG THEQGLKSAV
VKGMRNYMNT HKLVPKGITL TAEDIREGLV VILSCYVGDP QFQGQTKQRL NNTEVSAQVD
GALRPAIERY FNQNQNIAEA VVARMILAAR ARIASRAASQ AVSRKTAVSH RLNLPGKLAD
CSSTNPGDSE LFIVEGDSAG GSAKQGRDRR TQAILPLRGK VLNAEQASTQ KLLANKELSD
IVSALGCGMG PKLDLSRLRY GKIFLLMDAD ADGHHIATLL LTFFYRHMRQ LIDHGHVYLA
QPPLYRIDLG KETFWALDDI HKDQILANAR SNAKPNITRF KGLGEMNPSV LKKTTLDPRY
RSALRITVPE GEALGTDQTI AQLMGKDASA RYDIITDGIH EVDELDV
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