Gene Hoch_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2107 
Symbol 
ID8544493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2925059 
End bp2926204 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID646386814 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_003266545 
Protein GI262195336 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.61648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCG TCAAAGACAT CGGCGGCGAC GTGAAAAATC TCGGCCGCAT GGTACAGCGC 
ATGGTCCGGC GCAGCGCCCC GGGCGCGCCG CCGGGCACGG TGAGTCCGCC CGACGCGACC
GCGGTCGAGA CCCACATCCG CACCATGGCC TACAGCCCCG CCGGTCTGTC CGAGGAGGAA
GGCGTGGGCG TGGAGCGCTG CGTGCAACTG TGCGAGGGCG AGGAGACCGT GTGGATCGAC
GTCGTCGGCC TGGCGTCCAC CGACCTGCTG GTCGAACTCC GCGACCGCTT CGGCCTGCAC
CCGCTGGTCA TGGAGGACGT GGTCAACACC GGCCAGCGGC CCAAGCTCGA GGAGTACGAG
GACTACGACT TCATCGTCGT GCGCATCGTC TCGCCCGAGC CCAGTGAGGC GCCCGAGCAG
CTCTCGCTGG TGCTCAAGGA CAACTGCGTG ATGACCTTCC AGGAGCACCG CAACGACAGC
CTCGAGCCGG TGCGCACCCG GCTGCGGCGC TCGATGGGCC GCATCCGCCA CGCCAAGTCG
GATTACCTGG CCTACGCGGT GCTCGACGCG GTCATCGACC ACTACGTGCC CGTGCTCGAC
CGCTACGGCG AGCGCATCGA GGCGCTGGAG CGCGAGATCA TCTTCCGCCC CGATCCCGTG
CTGGTGGCGC ACATCTACGA GCTGCGCCAC GAGGTCGAGG AGCTGCGGCG CGCGGTGCGG
CCCATGCTCG ACGTGGTCGG CCGGCTGCAC AATGAGGAAG TGCCGCTGTT CAGCGAAGAG
GTCATGCCGT ATCTGCGCGA CTGCTACGAC CACACCGTCC GCCTGGTCGA TAACGTCGAC
CACCAGCGCG TGCTGGCCGC CAGCCTCATG GAGCTGCACC TCTCGAGCAT GAGCCAGCGG
ATGAACGAGG TGATGAAGGT GCTCACCATC ATCTCGACCA TCTTCATCCC GCTGTCCTTC
GTGGTCGGCC TGTACGGCAT GAACTTCGAC CCGACGGTGT CGCCCTGGAA TATGCCCGAG
CTGGGCTGGC GCTACGGCTA CCTGTTCGTC ATCGGCTTCA TGGTCGCGAT GGTGCTGCTG
CAGCTCGTCT ACTTCCGCCG CAAGGGCTGG CTCGGCGGCG GCCCCAAACA TCCGCCGCTG
TCGTAG
 
Protein sequence
MQGVKDIGGD VKNLGRMVQR MVRRSAPGAP PGTVSPPDAT AVETHIRTMA YSPAGLSEEE 
GVGVERCVQL CEGEETVWID VVGLASTDLL VELRDRFGLH PLVMEDVVNT GQRPKLEEYE
DYDFIVVRIV SPEPSEAPEQ LSLVLKDNCV MTFQEHRNDS LEPVRTRLRR SMGRIRHAKS
DYLAYAVLDA VIDHYVPVLD RYGERIEALE REIIFRPDPV LVAHIYELRH EVEELRRAVR
PMLDVVGRLH NEEVPLFSEE VMPYLRDCYD HTVRLVDNVD HQRVLAASLM ELHLSSMSQR
MNEVMKVLTI ISTIFIPLSF VVGLYGMNFD PTVSPWNMPE LGWRYGYLFV IGFMVAMVLL
QLVYFRRKGW LGGGPKHPPL S