Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2090 |
Symbol | |
ID | 8544472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2889022 |
End bp | 2891406 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646386793 |
Product | protein of unknown function DUF1111 |
Protein accession | YP_003266528 |
Protein GI | 262195319 |
COG category | [C] Energy production and conversion |
COG ID | [COG3488] Predicted thiol oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.126937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCCGAAA TCAAACGCTA TCGCTCATAC TTATGGCGGC TCTCGCTGGC GCTCTTATGC GCGTCGCTCA TCACCGCTTG CGGCGACGAT GAATCGCCGC AAGACCCCGA CGCCGGGCCC ACGCCCGACG CCGGACCGAC CCCGGAGATC GCCGAGGGCA TCTTCGCCCC CATGGGCGAG GTCATCCCCT CGGCCAACGC GGAGGAGAAG GCCATCTTCG AACGCGGTCT GGCCGTGGCC AAGCGCCGCT TCGACGACCA GACCGGCCTG GGCCCGCACT TCAACGTCAG CTTCTGCGGC GCCTGCCACG AGAAGCCGGT GTTTGGCGGT GCCGCCGGTC GCTATCGCAA CTTCCTGCTC ACCGGTCAGG TGCTCGAGGC CGACGGATCG TTCGTGCCCA CGGGTATCAG CGGCGTGCAA CCGCAGTACT CGAGCGACGA GGGCGTGCGC TTCGAGACCG ATCCCAAGAC CAACCGCATC GCCACCCGCA ACCCGATCCC GTTCTTCGGC GTCGGACTGC TGGCCGAAAT CCCCGAGAGC GAGATCCTGT CGCGCGCCGA TCCCGACGAC GCCGACGGCG ACGGCATCAG CGGCCGCCCC AACTACGAGG ACGGCTTCAT CGGCCGCTTC GGCATGAAGT CGCAGAGCGC GGCCATCGAA GCGTTCATCC GCGGCCCGCT CAACAACCAC CTCGGCATCA CCTCGAACCC TCTGTCCGCC GAGAGCCGCG CGCGTCTGCC GGTCGACAGC GCGGGTGACG ACGCGCTCAA CAACGCGGCC GGTCTGGCGC CGCAGGCGGG CGCGCCCAAC GAGCCGCTGT TCGACGACGA CGACGTGCCC GACCCCGAGC TGGGCGAGCA AGACCTCTTC GACCTGGTGG CCTTCTCCAT GCTCCTGGCC GCGCCGCAAC CCGACGCGCC CACCGCCGAG AGCGAAGCCG GCCGCGCCCG CTTCGAAACC CTGGGCTGCG CGAGCTGCCA CACGCCGGCG CTGCTCGGCC CGCGCGGGCT CATCCCCGCA TACACCGACC TGCTCATCCA CGACATGGGC GAGGAGCTGG CCGACGGCAT CTTCATGAAG TCGGCGACCG GCAGCGAGTT CCGCTCGGCG CCGCTGTGGG GCGTGGCCGC GACCGCGCCC TACCTCCACG ACGGCCGCGC CGACACCCTC GAGGAGGCCA TCCTGTGGCA CGGCGGCGAA GCCAAAGCCG CGCGCGACGC CTACGAGGCC CTGAGCGAGA CCGGCAAAGA CGAGGTCATC GCCTTCCTGC TCTCGCTCGG CGGAGCCAGC CAGTACAGCG AAGGCCTGGT GCCTCCGGGC GCGCCCATCC CCGAGGTCGG CAGCTACGGC GGCCCGGCCA GCGAGCTGTC GGCCGAGGAT GAGGACCTGT TCCTCCTGGG GCGGCAGATC TTCGACCGCG ACTTCTTCGC CGTCGGCGGC CTGGGGCCGT TCTTCAACGG CGACGCCTGC CGCGCCTGCC ACTTCGACCC GGTCATCGGC GGCGCTGGTC CCAGCGACGT CAACGTCATG CGCCACGGCC TCATCGGCGA GGACGGCGCG TTCCAGCCGC CCGAGGGCGG CGGCACCATC GCGCCGCGCC ACGGCATCTA CTACGATCAG CGCCCGGGCG TGGACGAGAA CGCCAACGTC TTCGAGGCCC GGCAGACCCC GCCGCTCTTC GGTCTGGGTC TGATCGAGAG CATCACCGAA GAGGAGATCC TCGCCAATGA GGACCCCGAG GACGAAGACG GCGACGGCAT CAGCGGCCGC GCCCATTACC TGGTGAACGA CGGCCGCCTG GGCCGCCTGG GCTGGAAAGC CAGCGTCCCC AGCGTGGCCG AGTTCGCGCG CGACGCCATG TCCAACGAGA TGGGCGTGAC CGTGCCCTTG CGCGAGGGCT TCACCTTCGG CTTCCTCGAG GACGACGACG GCATCGCCGA CCCCGAGATC GACGAGCAGA CCCTCGCGGC GCTCAGCTTC TACATGAGCT CGCTGGCGCC GCCGCCGCGC ACCTCGGTCG ATCCCGACAC CGAGGCCGAG GGCGAGATCC TGTTCGAGAC CACCGGCTGC GCCGACTGCC ACGTGCCCAC GCTCAAGGAC GCGGGCGGCA ACGACGTGCC GCTGTACAGC GACCTCCTGC TGCACGACGT CGCGCCCGAG GAGTTCTTCG GCATCGAGGA CGGCGACGCC AGCACGCGTG AGTTCCGCAC CCCGCCGCTG TGGGGCCTGG GTACCTCGGC GCCGTACATG CACAACGGCG TCGCGTACAC CATCGAGAGC GCCATCCTGC GTCACGACAG CGAGGCGCGC ACCGCCCGCG AGGCCTACGA GAACCTCCCG CCGGCCGAGC AGAACGCGCT GCTCGTGTTC CTCGAGTCGC TCTGA
|
Protein sequence | MSEIKRYRSY LWRLSLALLC ASLITACGDD ESPQDPDAGP TPDAGPTPEI AEGIFAPMGE VIPSANAEEK AIFERGLAVA KRRFDDQTGL GPHFNVSFCG ACHEKPVFGG AAGRYRNFLL TGQVLEADGS FVPTGISGVQ PQYSSDEGVR FETDPKTNRI ATRNPIPFFG VGLLAEIPES EILSRADPDD ADGDGISGRP NYEDGFIGRF GMKSQSAAIE AFIRGPLNNH LGITSNPLSA ESRARLPVDS AGDDALNNAA GLAPQAGAPN EPLFDDDDVP DPELGEQDLF DLVAFSMLLA APQPDAPTAE SEAGRARFET LGCASCHTPA LLGPRGLIPA YTDLLIHDMG EELADGIFMK SATGSEFRSA PLWGVAATAP YLHDGRADTL EEAILWHGGE AKAARDAYEA LSETGKDEVI AFLLSLGGAS QYSEGLVPPG APIPEVGSYG GPASELSAED EDLFLLGRQI FDRDFFAVGG LGPFFNGDAC RACHFDPVIG GAGPSDVNVM RHGLIGEDGA FQPPEGGGTI APRHGIYYDQ RPGVDENANV FEARQTPPLF GLGLIESITE EEILANEDPE DEDGDGISGR AHYLVNDGRL GRLGWKASVP SVAEFARDAM SNEMGVTVPL REGFTFGFLE DDDGIADPEI DEQTLAALSF YMSSLAPPPR TSVDPDTEAE GEILFETTGC ADCHVPTLKD AGGNDVPLYS DLLLHDVAPE EFFGIEDGDA STREFRTPPL WGLGTSAPYM HNGVAYTIES AILRHDSEAR TAREAYENLP PAEQNALLVF LESL
|
| |