Gene Hoch_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2089 
Symbol 
ID8544471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2888466 
End bp2889008 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content75% 
IMG OID646386792 
Productprotein of unknown function DUF192 
Protein accessionYP_003266527 
Protein GI262195318 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCC GAATCGCCAA GCCTGTGCGA GCGCGGCCCG GCGCCCCCCT GTTCCCCGCG 
CTGGCCGCGC TGAGCCTACT CGGCGGCGGC TGCAGCGCCC CGGCCAGCGA CGCGGACACC
GACGCGGGCC CTCGCTGCCC GGCCGAAACC CTGCCGGTGC AGCTCGCCAG CGCGGCCGCG
ACCCTGGTGG ACTTCTGCGC CGAGCTAGCG CGCACCGAGG ACGAGCGCCG GCGCGGCCTG
CGCGGTCATG CGCCGCTGGC CGCGGGCGAG GCCATGCTCA TCGAGTTTCC CTTCGAACTC
GACGGCATCT GCGTGGTCAA CGACGGCGTC AGCTTCTCCA TCGACGCGCT CATGGTCGCC
GGCGATGGCA CGGTGGTCGC CATCGAGTCC GAAATCCCCG CCGACGACCC CAGCGCGCGC
TGCCACGACG GCGTGCGCTG GATCTTCGAG ACCGCGGCCG GCGCGAGCGC GCCGATCGGC
CCCGGCGACT CGATGCGCAT CGGCGACGAC AGCGCCGCTG ACGCCGGCCT CAGCGCGCGC
TGA
 
Protein sequence
MAARIAKPVR ARPGAPLFPA LAALSLLGGG CSAPASDADT DAGPRCPAET LPVQLASAAA 
TLVDFCAELA RTEDERRRGL RGHAPLAAGE AMLIEFPFEL DGICVVNDGV SFSIDALMVA
GDGTVVAIES EIPADDPSAR CHDGVRWIFE TAAGASAPIG PGDSMRIGDD SAADAGLSAR