Gene Hoch_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2085 
Symbol 
ID8544467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2881941 
End bp2884088 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content70% 
IMG OID646386788 
Productcysteine-rich repeat protein 
Protein accessionYP_003266523 
Protein GI262195314 
COG category 
COG ID 
TIGRFAM ID[TIGR02232] Myxococcus cysteine-rich repeat 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTA CCCCAAAACT CGCACTCCTC GCGACGCTCG CGCTGGCGGC CTGTGGCGAC 
AATCTCGAAC CCATGGCCCC ACCGGACGCC GCCCCTATCC CGAGCGATCC AGACGCCGCG
CAGCAAGGCG CGCCGGTCGT GATGGATCAG GAAGCATCCA CGGACGAAGA CACCGCCGTG
GACATCACCA TCGAAGCCAG CGACCCCGAG GGGGACGCGC TGAGCTTCAC CATCGGCACG
CCCAGCAATG GCGCAATCTC GGGCGTCGCG CCGGACATCA CGTACACGCC CAACGCCGAC
TTCAACGGCA GCGACAGCTT CAGCGTCGAG GTATCGGACG GCACGCTCTC GAGCACGGCG
ACGGTGACGG TGACGGTCGC GCCGGTCAAC GACGCGCCGG TCGCCGCCAG CCAATTGCTC
GGCTTCCAGC CCAACACCGC GCTGGCCATC ACGCTCACGG GCAGCGACGT CGACGGCGAC
GCGCTGAGCT TCACCATCGT CACCCAGCCC GAAAACGGCA CGCTCACCGG CGATGACGCC
GAGCAGAGCT ACACCCCCGA CACCGACTTC CTCGGCGCCG ACAGCTTCAC CTTCGTGGTC
AACGACGGCA CCGTGGACTC GGCCGAGGCC ACCGTCACGC TCCAGGCCAT CGCGCCCGGC
TGCGGTGACG GCACCACCGA AGCGCCCGAG GAGTGCGACG ACGGCAACAA CGACAGCGGC
GACGGCTGCA CCGCCTTCTG CACCCTCGAG GAGTGTGGCG ACGGCGTGGT CAACAACAAC
GATGAGGTCT GCGACGACGG CAACACCGAG GCCGGCGACG GCTGCCGCGC CGACTGCCAG
GGCAGCGAGG TGTGCGGCGA CGGCTTCTTC GACACCGCGG CCGGCGAGGA GTGCGACGAC
GGCAACACCG CCGGAGGTGA CGGCTGCAGC GCGCAGTGCG TCATCGAGTG CGGCAACGGC
GTGGTCGACG AGGGCGAGGT CTGCGACGAC GGCAACACCG AGGCCGGCGA CGGCTGCCGC
GCCGACTGCC AGGGCAGCGA GGTGTGCGGC GACGGCACGA CCGACAGCGC CGCCGGCGAG
GAGTGCGACG ACGGCAACAC CGAGGACGGC GACGGCTGCG ACAGCGCCTG TGTGCTCGAG
AATCCCTTCA CCTCGGTGCC TCCGCAGATC ATCAGCGGCG ACCTGAGCTG CTCCACGGCA
ACTCCACACT CCGGCCGCAA AGCCGGCGTC GACCAGCTCG GACGCCTGTA CGTGGTCATG
AACTGCGGCG GCGAAGCCTT CGTCGCCACC AGCGGCGACC GCGGCCAGAC CTGGTCCGAT
CCCGTCAGCA CGGGCATCAC GGGCGTCGCC GAGGTAGCCC TCGAGGGCGG CGCCGCCGAT
GTCGCCTTCG TCGCCGCCAC GGTGAGCTCG ACCGAGTTCC CGCAGGGCGC GCTGCTGCTC
GCGCGCAGCA GCGACGGCGG CGCCACCTGG GGAGCGCCGA ACGCGCTCCA GGTCGGCATC
GCGTCCACGA CCGTGGGCCT CGACTCGGTC GAGGACAGCG TGTATGTCTC GGTCGTCCCC
GTCAGCGGCC AGATCGCCGT CCTGCGCAAC ACGAGCAGCG GCGAGGGCGC CTTCGAGAGC
ACCATCATCG CGCAGACCGC GGCGTTTTTC GACATCGTGG TCGATAAAAT CTCGGGCGCG
GTCATCTCGG GAAGTGACGA CCCGACGTAT CGCGTGCGCG TGAGCAACGA CGGCGGTCAG
ACCTTCGGCC CCGAGTCTGT CCCGCCGGGC TCGGCGTTCT TCTCGGACTG GGTCGGCTCC
AACGGCTTCC TCTACGTCAC CGGCTCGGGC GACGACAACA TCGACGTCAT CCCGCTCGAC
GCTCCGGGCA CCAGCACGCA GGTGGCCGGA CTGCCCTTGA TCCCGGGCCC GGCGCCGGTC
CGCGCCATCG ACGCCGACGC GCTCGGCAAC GCCTACGTGG TCACGCAGCT CGCCGCCGGC
GTCCAGCTCG ACCGCATGCT CGTCGGCGCC ACCGCGATCG ACGCGGGTGA TGCGCGCAGC
TACGACGTGG GCACCGCCCC GGCCGTGGGC GCGCTGCCGT CGAACAACGG CGCCCTGGTC
GTGTACACCG ATGGCACCTC GGTGTACGGC GCCATCGAAG TGTACTGA
 
Protein sequence
MSSTPKLALL ATLALAACGD NLEPMAPPDA APIPSDPDAA QQGAPVVMDQ EASTDEDTAV 
DITIEASDPE GDALSFTIGT PSNGAISGVA PDITYTPNAD FNGSDSFSVE VSDGTLSSTA
TVTVTVAPVN DAPVAASQLL GFQPNTALAI TLTGSDVDGD ALSFTIVTQP ENGTLTGDDA
EQSYTPDTDF LGADSFTFVV NDGTVDSAEA TVTLQAIAPG CGDGTTEAPE ECDDGNNDSG
DGCTAFCTLE ECGDGVVNNN DEVCDDGNTE AGDGCRADCQ GSEVCGDGFF DTAAGEECDD
GNTAGGDGCS AQCVIECGNG VVDEGEVCDD GNTEAGDGCR ADCQGSEVCG DGTTDSAAGE
ECDDGNTEDG DGCDSACVLE NPFTSVPPQI ISGDLSCSTA TPHSGRKAGV DQLGRLYVVM
NCGGEAFVAT SGDRGQTWSD PVSTGITGVA EVALEGGAAD VAFVAATVSS TEFPQGALLL
ARSSDGGATW GAPNALQVGI ASTTVGLDSV EDSVYVSVVP VSGQIAVLRN TSSGEGAFES
TIIAQTAAFF DIVVDKISGA VISGSDDPTY RVRVSNDGGQ TFGPESVPPG SAFFSDWVGS
NGFLYVTGSG DDNIDVIPLD APGTSTQVAG LPLIPGPAPV RAIDADALGN AYVVTQLAAG
VQLDRMLVGA TAIDAGDARS YDVGTAPAVG ALPSNNGALV VYTDGTSVYG AIEVY