| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2076 |
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| Symbol | |
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| ID | 8544458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2869080 |
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| End bp | 2875403 |
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| Gene Length | 6324 bp |
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| Protein Length | 2107 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386779 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_003266514 |
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| Protein GI | 262195305 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCT CGCGAGTGAA GTCCAACCCC GAGGAACTCA CGAAGAAGCA GATCTTGTCA
GCGCTGCGCG CCTTCAAGCG CGGCGAGTTC TCGACCCGCC TGCCCGACGA TCTCATCGGC
ATCGACGGCC AGATCTGCGA GACCTTCAAC GACATCCTCA CGCTCGCCGA GACGCTGAGC
ACCGAGGTCG GCGTGCTGCG CGGCGACGTC GGCAGCGACG GTCACGTGCG CCGGCGCCTG
CGCCGCAACG GCGCGCGCGG CGGCTGGGCC GTGTACGTCA CCTCGGTCAA CGAGCTGATC
GACGACTTGA CCAACCACCT GTCCGAAATC GCCGCCGTGG TCGCGGCCGT GGCCCGCGGC
GACCTCACGC AGCGCATCGA GATCGAGGGC AGCGACGAGC CGCTGCAGGG CGCGTTCTTG
CGCTACGCGC GCACGGTCAA CGACATGGTC GACCGCCTGG CCGCGTTCAG CTCGGAGGTC
ACGCGGGTGG CGCTCGACGT CGGCGTCGAG GGCAAGCTCG GCGCCCAGGC GCGCATCAAA
GGCGTCGAGG GCACGTGGAA GGAGCTGACC GACAGCGTCA ACTCGATGGC CAGCAACCTC
ACCTCGCAGG TGCGCGAGAT CGCGCGCGTG ACCACGGCGG TGGCCCAGGG CGACCTGACC
AAGACCATCA ACATCGAGGT CCGCGGCGAG CTGCTGGCGC TCAAGAACAC CATCAACACC
ATGGTCGACC AGCTCGGCTC GTTCGCCGAC GAGGTCACGC GCGTGGCCCG CGAGGTCGGC
ACCGAGGGCA TGCTCGGCGG CCAGGCGCAG GTGCGCGGGG TCTCGGGCGT GTGGCGCGAG
CTGACCGAGA ACGTCAACTC GATGGCCAAC AACCTCACCT TGCAGGTGCG CAACATCGCC
GAGGTGGCCA CCGCGATCGC GCGCGGCGAC CTCAGCCGCA AGATCACGGT CGAGGTCGCC
GGCGAGCTGC TCGAGCTCAA GCAGACCATC AACACCATGG TCGATCAGCT CGGCTCGTTC
GCGGCCGAGG TGACGCGTAT GGCGCGCGAG GTCGGCACCG AGGGCGTGCT CGGCGGCCAG
GCCGAGGTCG GCGAGATCTC GGGCGTGTGG CGCGAGCTGA CCGAGAACGT CAACTCGATG
GCCAACAACC TCACCCAGCA GGTGCGCAAC ATCGCCGAGG TGACCACGGC CATCGCCGAG
GGCGATCTCA GCCGCAAGAT CACGGTCGAC GCGCGCGGCG AGATCCTGGC GCTCAAGAAC
ACGGTCAACA CCACGGTCGA CAAGCTCAAC AGCTTCTCGG CCGAGGTCAC GCGCGTCGCC
CGCCTGGTCG GCACCGAGGG CACGCTGGGC GTGCAGGCCG AGGTCAAAGG CGTCTCGGGC
ATCTGGAAGG AGCTGACCGA CAACGTCAAC CTGATGGGCA GAAACCTCAC CGACCAGGTG
CGCGACATCG CCAACGTCAC CACCGCGGTG GCCAACGGCG ATCTCAGCAA GAAGATCACG
GTCGAGGTCA AAGGCGAGAT CCTGGCGCTC AAGAACACCA TCAACAACAT GGTGGACTCG
CTGGGTTCGT TCGCCGACGA GGTCACGCGC CTGGCGCGCG AGGTCGGCAC CGAGGGCGTG
CTCGGCGGCC AGGCGACCGT GGTCGGGGTG TCCGGTATCT GGAAGGAGCT GACCGACAAC
GTCAACTCCA TGACCAACGA CCTCACCAAC CAGGTGCGCA GTATCGCCGA GGTGGCCGCG
GCCGTGGCCT CGGGCGAGCT GAGCAAGAAG ATCGCGGTCG ACGCGCGCGG CGAGATGCTC
GATCTCAAGA ACTCGATCAA CACCATGGTC GATCAGCTCA GCCTGTTCGC CGACGAGGTC
ACGCGCATGT CGCGCGAGGT CGGCGTCGAG GGCAAGCTGG GCGGGCAGGC CGAGGTCGAG
GGCGCGCGCG GCATCTGGAA GGAGCTGACC GACAACGTCA ACCTGATGGG CCGCAACCTC
ACCAACCAGG TGCGCGACAT CGCCGAGGTG ACCACGGCCG TGGCCCGCGG CGACCTCACG
CGCAAGATCG CGGTCGACGC GCGCGGCGAG ATCCTCGAGC TGAAGAACAC GATCAACACC
ATGGTCGATC AGCTCGGCTC GTTCGCCGAC GAGGTCACGC GGCTGGCCAG CGAGGTCGGC
GTCGAGGGCC GCCTGGGCGG TCAGGCCGAC GTGCGCGGGG TCTCCGGGAC GTGGCGGCAT
CTCACCGACG CGGTCAACTC GATGGCCCGC AACCTCACCG ACCAGGTGCG CAACATCGCC
CAGGTGGCCA CGGCCATCGC CCAGGGCGAC CTGCAGAAGA AGATCGTGGT CGACGCGCGC
GGCGAGATCC TCGAGCTGAA GAACACGATC AACACCATGG TCGGCCAGCT CAGCTCGTTC
GCCGAGCAGG TGACGCGCGT GGCCCGCGAG GTCGGCACCG AGGGCAAGCT GGGCGGCCAG
GCCTCGGTCG AGGGCGTCTC GGGCATCTGG AAGGAGCTGA CGGACAACGT CAACCTGATG
GCCTCGAACC TCACCAACCA GATGCGCGAC ATCTCGCAGG TGGCGACCGC CATCGCCCAG
GGCGATCTCG GACAGAAGGT CACGGTCGAG ACCCGCGGCG AGCTGCTCGA GCTGAAGAAC
ACGATCAACA CCATGGTCGA TCAGCTGGGC TCGTTCGCCG ACGAGGTGAC GCGCGTGGCC
CGCGAGGTCG GCGTCGAGGG CCGCCTCGGC GGCCAGGCCG ACGTGCGCGG GGTCTCGGGC
ATCTGGAAGG AGCTGACCGA TAACGTCAAC CTGATGGGCC GCAACCTCAC CGACCAGGTG
CGCGACATCG CCGATGTGAC CACGGCGGTG GCCAACGGCG ACCTGAGCAA GAAGATCACG
GTGGCGGTCA AGGGCGAGAT CCTGGCGCTG AAGAACACCA TCAACAGCAT GGTGGACTCG
CTGGGCTCGT TCGCCGACGA GGTGACGCGC CTGGCGCGCG AGGTCGGCAC CGAGGGCACG
CTGGGCGGCC AAGCCGAGGT GCGCGGGGTC TCGGGCATCT GGAAGGAGCT GACCGACAAC
GTCAACCTGA TGGCCAGAAA CCTCACCGAG CAGGTGCGCG GCATCGCGCG CGTGGTCACT
GCGGTGGCCA ACGGCGATCT CAAGCAGCAG CTCATGCTCG AGGCGCGCGG CGAGATCGCC
ACCCTGGTCG ACACCATCAA CGACATGATC GTCACGCTCT CGCGTTTTGC CGACCAGGTG
TCCGGCGTCG CCCGCGACGT GGGCGTCGAG GGCCGGCTGG GCGGTCAGGC GGTGGTGCCG
GGCGCGGCCG GTATCTGGCG CGACCTCACC AACAACGTCA ACGAGCTGGC CGGCAACCTC
ACCCGCCAGG TGCGCGCCAT CGGCGACGTG GCCACGGCCG TGACCAAGGG CGAGCTCACC
CAGAGCATCG ACGTCGAGGC CCGCGGCGAG GTCGCGATCC TCAAGGACAA CCTCAACCAG
ATGATCCAGA CCCTGGCCCA GACCACGCGG GTCAACCAGG AGCAGGACTG GCTCAAGACC
AACCTCACGC GCTTCACGCG CATGCTCCAG GGCCAGCGCG ATCTGCTCAC GGTTGCCCGC
CAGGTGCTCT CGGAGCTGGC GCCCGTGGTC GACGCCCAGC ACGGCGGCTT CTACATGGTG
TCGCCGGGCG ACGACGAGCC CACGCTGCGC CTGTTCGCCT CGTACGCGTA CATGGAGCGC
AAGCACGTGG CCAATCAGTT CGGCTTTGGC GAGGGCCTGG TCGGCCAGGC CGCGCTCGAG
CGCAAGCGCA TCCTGGTGAC CTCGCTGCCC GACGACTACG TGCAGATCAC CTCGGGCCTG
GGCGAGGCCC GGCCGCGCGC GGTGGTGGTC GTGCCCGTGG TCTTCGAGGA GGAGGTCAAG
GGCGTCATCG AGCTGGGCTC GTTCCAGATC TTCTCCTCGA TTCAGCTCGC CTTCCTCGAC
GAGCTGATCG AGAGCCTCGG CATCGTGGTG GCGACCATCG AGGCCACCAT GCGCACCGAT
GAGCTGCTGC GGCAGTCGCG CAACCTGGCC GAGGAGCTGA CCACGCAGCA GGAGGAGCTG
CAGCAGACCA ACGAGGAGCT GGAGGAGAAA GCCCGCCAGC TCACCGAGCA GAAGTCCGAG
GTCGAGCGCA AAAACCAGCA GGTCGAGCTG GCCCGCCAGG AGCTGGAGGA GAAGGCCGAG
CAGCTCGCGC TCACCTCGCG CTACAAGTCC GAGTTTTTGG CCAACATGAG CCACGAGCTG
CGCACGCCGC TCAACAGCTT GCTGATCTTG TCGCGCCAGC TCGCGACCAA CCGCGACAAC
AATCTTTCGG ACAAGCAGGT GGAATACGCC AGCACGATCC ATCAGTCGGG CGCCGACCTG
CTGTCGCTGA TCAACGAGAT CCTCGACCTG GCCAAGATCG AGTCGGGGAC CATGGCGGTC
GAGGTGAGCT CGGTGTCGTT CTCGCAGCTC TCCGACTACG TCGAGCGCCT GTTCCGCCAG
GTCGCCGACG AGAGCGGCGT GGTCTATCAG ATCGAATGCG CCGACGAGCT GCCGGCGGCC
ATCGAGACCG ACGAGCAGCG GCTGCGCCAG GTGCTGCGCA ATCTGCTGTC GAACGCCTTC
AAGTTCACCA AGAAGGGCGA GGTGATGCTG CGGATGTCGA CCGTCAAGCC CGAGGCCGAC
GGCGACTACG GCGACGAGCC CTTCCTGGTC GCGTTCTCGG TGAGCGACAC CGGCATCGGT
ATTCCCAAGG ACAAGCAGCG CATCATCTTC GAGGCCTTTC AGCAGGCCGA TGGCGGCACC
AGCCGGCGCT TTGGCGGCAC CGGCCTGGGC CTGTCGATCA GCCGCGAGAT CGCCGAGCTG
CTCGGCGGCG AGCTGGATGT CGAGAGCGAG CCCGGACGCG GCAGCACCTT CACGCTGTAC
CTGCCGCCCT CCTACCGCGG GCCGGCGCGC GCGCGCGGGG CGTCCGAAAT CAAGCGCTCC
GGGCCCAAGC CGCGGGTCGC CGAGCTGCCC GGCGCTGCGC TCAAGGCGCT GCTGCCGACG
CGCGCGGCGA GCGAGGCCGG ACACGCGTCC GATGACGACG AGAGCGAGAT GCCGCAGCAC
ATCTCGACGC GCTCGGTGGC CGACGATCGC AAGCACATCT CGGCGGGCGA CCGCGTGCTG
CTTATCATTG AGGACGACGA TGTGTTCGCG CGTACGCTGC TCGACGCGGT GCGCGAACGC
GGCTTCCGCG GCCTGGTGGC GCTCTCGGGC AACGAGGGCC TGGCCGTGGC CAAGAGCTAC
AAGCCCGACG CCATCACGCT GGACCTGCGC CTGCCCGACA TGGACGGCTG GGTGGTGCTC
GACCGGCTCA AGCACGACTC CGAGACCGGC CACATTCCGG TGCACATCAT CAGCGCTGCT
GCGGACGAGC GCCGCGGCCT GGAGAACGGC GCGCTGGCCT TCCTCAACAA GCCGGTCGGC
CCCGAGGCGC TGGACGTGGC GCTCTCGGAC ATCGAGTCGT TTTTGGACAG GCGGGTCAAG
CGGGTGCTGA TCGTCGAGGA CGACGATGTC CAGCGCCGCG CCCTGGTCGA GCTGATCGAC
GGTGAGGACG TGAGCACCGA GGCTGTGGGC AGCGCCGAGG CCGCGCTGCA GGCGCTCGAG
TCGGGCACCT TCGACTGCAT GATCATCGAC CTCAAGCTGC CCGAGATGTC GGGCGACGAG
CTGATCGAGA AGTTCAAGGA GCGGCCGGCG TTCCGGCGCA TGCCGGTGAT CGTGTACACC
GGCAAGGAGC TGAGCGAGGG CGACGAGATC AGCCTGCGCC GCCTGGCCGA GACCATCATC
GTCAAGGACG TGCGCTCGCC CGAGCGCCTG CTGGCCGAGA CCATGCTGTT TTTGCACCGG
GTGGAGAGCG ATCTGCCCGA GTCCAAACAG CGCATGCTGC GCAACCGCTT CGCCGAGGGC
GACCCGGCGC TGGCCGACAA GAAGATCCTC GTGGTCGACG ACGACGTGCG CAACATCTTC
GCTATCACCA CGATCCTCGA GCAGCACCTG ATGGACGTGG TCTACGCCGA GAACGGCCGC
GAGGCGCTCG ACCAGCTCGA CCGCAACCCG GACATCGACA TCGTGCTCAT GGACATCATG
ATGCCCGAGA TGGACGGCTA CGAGGCCACG CGCCGCATCC GCAGCGATGG CCGCTACGGG
CGCCTGCCGG TCATCGCGCT CACGGCCAAG GCGATGAAGG GCGATCGCGA TAAGTGCATC
GAGGCCGGCG CGTCCGACTA CATCACCAAG CCGGTGGATC CCGACCAGCT CATCTCGCTG
TTGCGGGTGT GGCTGTACCG CTAG
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| Protein sequence | MATSRVKSNP EELTKKQILS ALRAFKRGEF STRLPDDLIG IDGQICETFN DILTLAETLS
TEVGVLRGDV GSDGHVRRRL RRNGARGGWA VYVTSVNELI DDLTNHLSEI AAVVAAVARG
DLTQRIEIEG SDEPLQGAFL RYARTVNDMV DRLAAFSSEV TRVALDVGVE GKLGAQARIK
GVEGTWKELT DSVNSMASNL TSQVREIARV TTAVAQGDLT KTINIEVRGE LLALKNTINT
MVDQLGSFAD EVTRVAREVG TEGMLGGQAQ VRGVSGVWRE LTENVNSMAN NLTLQVRNIA
EVATAIARGD LSRKITVEVA GELLELKQTI NTMVDQLGSF AAEVTRMARE VGTEGVLGGQ
AEVGEISGVW RELTENVNSM ANNLTQQVRN IAEVTTAIAE GDLSRKITVD ARGEILALKN
TVNTTVDKLN SFSAEVTRVA RLVGTEGTLG VQAEVKGVSG IWKELTDNVN LMGRNLTDQV
RDIANVTTAV ANGDLSKKIT VEVKGEILAL KNTINNMVDS LGSFADEVTR LAREVGTEGV
LGGQATVVGV SGIWKELTDN VNSMTNDLTN QVRSIAEVAA AVASGELSKK IAVDARGEML
DLKNSINTMV DQLSLFADEV TRMSREVGVE GKLGGQAEVE GARGIWKELT DNVNLMGRNL
TNQVRDIAEV TTAVARGDLT RKIAVDARGE ILELKNTINT MVDQLGSFAD EVTRLASEVG
VEGRLGGQAD VRGVSGTWRH LTDAVNSMAR NLTDQVRNIA QVATAIAQGD LQKKIVVDAR
GEILELKNTI NTMVGQLSSF AEQVTRVARE VGTEGKLGGQ ASVEGVSGIW KELTDNVNLM
ASNLTNQMRD ISQVATAIAQ GDLGQKVTVE TRGELLELKN TINTMVDQLG SFADEVTRVA
REVGVEGRLG GQADVRGVSG IWKELTDNVN LMGRNLTDQV RDIADVTTAV ANGDLSKKIT
VAVKGEILAL KNTINSMVDS LGSFADEVTR LAREVGTEGT LGGQAEVRGV SGIWKELTDN
VNLMARNLTE QVRGIARVVT AVANGDLKQQ LMLEARGEIA TLVDTINDMI VTLSRFADQV
SGVARDVGVE GRLGGQAVVP GAAGIWRDLT NNVNELAGNL TRQVRAIGDV ATAVTKGELT
QSIDVEARGE VAILKDNLNQ MIQTLAQTTR VNQEQDWLKT NLTRFTRMLQ GQRDLLTVAR
QVLSELAPVV DAQHGGFYMV SPGDDEPTLR LFASYAYMER KHVANQFGFG EGLVGQAALE
RKRILVTSLP DDYVQITSGL GEARPRAVVV VPVVFEEEVK GVIELGSFQI FSSIQLAFLD
ELIESLGIVV ATIEATMRTD ELLRQSRNLA EELTTQQEEL QQTNEELEEK ARQLTEQKSE
VERKNQQVEL ARQELEEKAE QLALTSRYKS EFLANMSHEL RTPLNSLLIL SRQLATNRDN
NLSDKQVEYA STIHQSGADL LSLINEILDL AKIESGTMAV EVSSVSFSQL SDYVERLFRQ
VADESGVVYQ IECADELPAA IETDEQRLRQ VLRNLLSNAF KFTKKGEVML RMSTVKPEAD
GDYGDEPFLV AFSVSDTGIG IPKDKQRIIF EAFQQADGGT SRRFGGTGLG LSISREIAEL
LGGELDVESE PGRGSTFTLY LPPSYRGPAR ARGASEIKRS GPKPRVAELP GAALKALLPT
RAASEAGHAS DDDESEMPQH ISTRSVADDR KHISAGDRVL LIIEDDDVFA RTLLDAVRER
GFRGLVALSG NEGLAVAKSY KPDAITLDLR LPDMDGWVVL DRLKHDSETG HIPVHIISAA
ADERRGLENG ALAFLNKPVG PEALDVALSD IESFLDRRVK RVLIVEDDDV QRRALVELID
GEDVSTEAVG SAEAALQALE SGTFDCMIID LKLPEMSGDE LIEKFKERPA FRRMPVIVYT
GKELSEGDEI SLRRLAETII VKDVRSPERL LAETMLFLHR VESDLPESKQ RMLRNRFAEG
DPALADKKIL VVDDDVRNIF AITTILEQHL MDVVYAENGR EALDQLDRNP DIDIVLMDIM
MPEMDGYEAT RRIRSDGRYG RLPVIALTAK AMKGDRDKCI EAGASDYITK PVDPDQLISL
LRVWLYR
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