Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2054 |
Symbol | |
ID | 8544436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2841254 |
End bp | 2842477 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646386757 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_003266492 |
Protein GI | 262195283 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.390649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.93164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGA CCTTCAGCTC TCTTCTCGCG ACTGGCCTGG TGGGCGGTCT CCTCGGCGGC GCGCTCCTGA CCGGTTGCGC CATGGACTCC CTCGGCGATG CGCCCGAGGA CTTCGAGGTG GGCACCACCA TGGCGCCGCT GCTGGGCGGC GGTCCCTCTG CGCAGGTCAT TCCCGATCAG TACGTGGTGG TGTTCCACGA CGAGGTCGGC GTGGCCAGCG TCAACAGCGC CATGGACCTG GTCGAGGAGA GCAAGGAAAA CGAGATTCTG CACACCTACA CGGTGCTCAA CGGTTTCGCC GGCAAGCTCG ACGACGCCAC CCTGGACAAG CTGCGCCGCG ACTCGCGCGT GGCCTACATC GAGCGCGACC AGGTGATGAG CATCGACGCC ACGCAGACCG GCGTGCGCCC CGGTCTCGAC CGAGTCGATC AGCGCAACCT GCCCGGCAAT AACAAGTACA ATGACCGCGG CTTCAACGGC TCCGGCGTAC ACGTGTACGT CATCGACACC GGCATCCGCT CGCACTCCGA GTTCGGCAAT CGCCTCAAAG CGGGCGCCAC GGCTATCAAC GACGGCCGCG GCACCGACGA CTGCAACGGC CACGGCACCC ACGTGGCCAG CACCATCGCG GGCACGGTCA CGGGCGTGGC CAAGAACGCC CGCGTCCATC CGGTGCGCGT GCTCGACTGC AACGGCTCGG GCTCGACCTC GGGCGTCATC GCCGGCGTCG ACTTCGTGCG CACCAATGGC GTGCGCCCGG CGGTGGCCAA CATGAGCCTG GGCGGCGGCG CCTCAAGCGC GCTCGACAGC GCCATCAACA ACCTCTTCGA CTCCGGCGTG CTGCCGGTGG TGGCCGCTGG CAACGAGAAC CAGGACGCCT GCAACGTGTC GCCGGCGCGC GCCTCCAAGG CCTTCACCGT GGCCGCGGTC GACAACAACG ACCGCCGCGC CTCGTTCTCG AACTTCGGCT CCTGCGTGAA CATCCACGCC CCGGGCGTGA GCGTGCGCGG CGCCAGCATC AGCGGCAACA ACGCCTTCGT CAACCTGTCC GGCACCTCGA TGGCCAGCCC GCACGTGGCC GGCGTGGCCG CGATGTTCCT CGACCGCAAG AACGGCGCCA CCGCCGGCAA CGTGCGCAAC AAGCTGCAGA ACATCGCCAC CACCGGCAAG GTGACCAACC GCCAGGGCTC GCCCAACCGC CTGCTGTTCA ACGACATCCG CTGA
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Protein sequence | MRKTFSSLLA TGLVGGLLGG ALLTGCAMDS LGDAPEDFEV GTTMAPLLGG GPSAQVIPDQ YVVVFHDEVG VASVNSAMDL VEESKENEIL HTYTVLNGFA GKLDDATLDK LRRDSRVAYI ERDQVMSIDA TQTGVRPGLD RVDQRNLPGN NKYNDRGFNG SGVHVYVIDT GIRSHSEFGN RLKAGATAIN DGRGTDDCNG HGTHVASTIA GTVTGVAKNA RVHPVRVLDC NGSGSTSGVI AGVDFVRTNG VRPAVANMSL GGGASSALDS AINNLFDSGV LPVVAAGNEN QDACNVSPAR ASKAFTVAAV DNNDRRASFS NFGSCVNIHA PGVSVRGASI SGNNAFVNLS GTSMASPHVA GVAAMFLDRK NGATAGNVRN KLQNIATTGK VTNRQGSPNR LLFNDIR
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