Gene Hoch_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2049 
Symbol 
ID8544431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2831523 
End bp2832518 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID646386752 
Productprotein of unknown function DUF403 
Protein accessionYP_003266487 
Protein GI262195278 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.715011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCGC GCGTCGCAGA GCACTGTTTC TGGATGCATC GCTACGTCGA GCGGGCCGAG 
AACATGGCCC GACTGCTCCA GGTCAATCGC AACTTCGTGC TCGACGTCAA CGTGCCGCGG
GCCGAGCGCT GGCTGCCGGT GGTGGTGGTC TCGGGTGAGC AGGAGCGCTT CGGCGAGCTG
TACACCGAGG AGATGACCAA CGACGGCGAG CTGGTCGAGG AGTACCTCAC CTGGAACGAG
GACAACCCGG TGTCGCTGCT CAGCTCGCTG CGCTGGGCGC GCGAGAACGC GCGCACCATC
CGCGAGGTCA TCAGCCTCGA GATGTGGCGC GCGCTCAACA GCACCTACCG CTGGATGGTC
GACGGCGAGG GCCGACGGCT CTACCAGTCG GAACGCGACG AGTTCTACGA CCGGGTGCGC
TCGTCGGCCG CGCTGTTCGA CGGGGTGTTC CACAACACCA TCCTGCACAC CGAGCCCTAC
TACTTCATGT TGCTCGGCAT CTACCTCGAG CGCGCCGGCC AGACCGCGCG CATCCTCGAC
GTCAAGCATC ACCAGGTGAA CCGCGACGGC GCGGCCTCGG CCGTGGACTC GGCGCGCAGC
CTGGCGCTGT TGCGCTCGTG CTCGGCGACC GAGCCGTTCT TCAAGCACGT GCGCGCGGCG
CCCAGCGGCA AGACGATCGC GCCCTTCCTC GTGCTCGAGG AGCGCTTTCC GCGCTCGGTG
CTGCACTGCC TGGCGCGCGC GCGCGCGTGC CTCACCGACA TCCGCGGCTT CACGCAGCGC
GCCGCGCCCA CGCGTTCGGC CCAGCTCCTC GACGCCGTGG TCGGCAGCCT GCGCGCGCAC
ACGGCCGGCA GCTTGTTCGA GACCGGCCTG CACACCGAGC TCACCCGGGT GATCGATACG
GCAGCCGAGA TCTGCAGCGC GTTCCGCGAG GACTACTTCG ACCCCAGCTT TACGAGCGCA
AGCCCAACAC TCGGGGTACA GTCCCAAAAA CAATGA
 
Protein sequence
MISRVAEHCF WMHRYVERAE NMARLLQVNR NFVLDVNVPR AERWLPVVVV SGEQERFGEL 
YTEEMTNDGE LVEEYLTWNE DNPVSLLSSL RWARENARTI REVISLEMWR ALNSTYRWMV
DGEGRRLYQS ERDEFYDRVR SSAALFDGVF HNTILHTEPY YFMLLGIYLE RAGQTARILD
VKHHQVNRDG AASAVDSARS LALLRSCSAT EPFFKHVRAA PSGKTIAPFL VLEERFPRSV
LHCLARARAC LTDIRGFTQR AAPTRSAQLL DAVVGSLRAH TAGSLFETGL HTELTRVIDT
AAEICSAFRE DYFDPSFTSA SPTLGVQSQK Q