Gene Hoch_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2023 
Symbol 
ID8544405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2792494 
End bp2793450 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content78% 
IMG OID646386726 
Producthypothetical protein 
Protein accessionYP_003266461 
Protein GI262195252 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.374648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGA ACAAGCGCAA CACCGGGCGC GCGGGCCAGC GCGAACTCGA CGCCAGCAGC 
ATCGCCGGTA TCGTCTTGCC GCCGCCGCAG CGGCGCGCGG CCAGCGCAGC CTGTCAGCGG
CGCGAGCTGC CGGCCGGTAG CCCGGCGGCG CTGGTCCTGG GCAGCCAGCG TCGCAGCGCG
CGGCCCTGGC TGGCGGCCCT GAGCACGGCC GCCGCGCTGC ATCTCGGCGC CGGCACCGCG
CTCGTCGTCG GACACACGTC CGCGCCCGCA GTGGCGCCCG CCCCCGAGCA GCGCACGGTG
CGCATCGACC ACGTCGTCGA TCTCGCGCCG CCGCCCGCCG AGCTGCCGCC GCCCGCGCCC
GCCGAACCGC CGCCGCCGCC GGCAGAAGCG CCGCCGCCCC CGGCCGCCGC GCCGCCCGCG
CGTGCGCCCG CCCGCGCTCA GGCCCAAGCA GCCGCGCGCG CCCCCGCGCA GGCCGGCAAG
GTGCTCGCGC AGGAGCCGAG CGCCGAGGCG CCGCTCGACT TCACCGGCTT CGACATCGCC
ACCGGCGAGG GCGTGCAGTT CGCCGGCGGC GTCACCGCGT CCTCGGGTAC CAGCGAGCAG
GCCGTGCACG GCGCAGGCGT GGCCGCGGGC GGCAGCGCCT CCGCGGCCGC CGCCGATACC
GGCGCGGACG TCAGCTCGCG CGCGCGGCCC GTGAGCCTGC GCGCGCGCGA CTGGAGCTGT
CCCTGGCCGC GCGCGGCCGA CGTGCTGTCC ATCGATGAAC AGGTGGTGCT GCTGCGCTTG
GTCGTACGCG CGGACGGCAG CGTTGCCTCG GCCACCACGC TCTCGGATCC CGGCTACGGA
TTCGCCGAGG CGGCGCTGCA ATGCGCGCGC TCACACCGCT TCCAGCCAGC CACCGACGCC
GCCGGCGAGC CGGTGCTGTC GACCTCACCG CCGATCCGCG TCACCTTCGT GCGCTGA
 
Protein sequence
MSANKRNTGR AGQRELDASS IAGIVLPPPQ RRAASAACQR RELPAGSPAA LVLGSQRRSA 
RPWLAALSTA AALHLGAGTA LVVGHTSAPA VAPAPEQRTV RIDHVVDLAP PPAELPPPAP
AEPPPPPAEA PPPPAAAPPA RAPARAQAQA AARAPAQAGK VLAQEPSAEA PLDFTGFDIA
TGEGVQFAGG VTASSGTSEQ AVHGAGVAAG GSASAAAADT GADVSSRARP VSLRARDWSC
PWPRAADVLS IDEQVVLLRL VVRADGSVAS ATTLSDPGYG FAEAALQCAR SHRFQPATDA
AGEPVLSTSP PIRVTFVR